Step I Biochem Pathway Map
-
Upload
maya-seegers -
Category
Documents
-
view
11 -
download
0
description
Transcript of Step I Biochem Pathway Map
GLYCOLYSIS & GLUCONEOGENESIS
HMP SHUNT
PYRUVATE DH
FA β-OXIDATION
CITRIC ACIDCYCLE
UREA CYCLE
USM
LE S
TEP
I PAT
HW
AYS
CYTO
SOL
MIT
OCH
ON
DRI
AL
MAT
RIX
H2O
H2O
NAD
NADH + H+ + CO2
NAD + CoA
NADH + H+ + CO2
GTP + CoA
FAD
FADH2
NAD
NADH + H+
H2O
GDP + Pi
ATP
AMP + PPi
H2O + CO2 + 2ATP
NAD + H2O
NADH + H+
H2O
FAD
FADH2
NAD
NADH + H+
AMP + PPi
H2O
Pi
H2O
Pi
ATP + CO2ADP + Pi
GDP + CO2
GTP
HS-CoA
HS-CoA + ATP
Carnitine
Carnitine
ADP
ATP
ADP
ATP
NAD + Pi
NADH + H+
ATP
ADP
H2O
ATP
ADP
CO2
TPP
NAD
NADH + H+
NADP
NADPH + H+ H2O
H+
NADP
NADPH + H+
HS-CoA
Glucose
Glucose-6-phosphate
Fructose-6-phosphate
Fructose-1,6-bisphosphate
Dihydroxyacetone phosphateGlyceraldehyde-3-phosphate
1,3-Bisphosphoglycerate
3-Phosphoglycerate
2-Phosphoglycerate
Phosphoenolpyruvate
PyruvateLactate DH
Lactate
CORI CYCLE
Oxaloacetate
Hydroxyethyl-TPP
Acetyl-lipoic acid
Acetyl-CoA
Lipoic acid
TPP
HS-CoA
Dihydrolipoic acid
FAD
FADH2
NAD
NADH + H+Citrate
cis-Aconitate
Isocitrate
α-Ketoglutarate
Succinyl-CoASuccinate
Fumarate
Malate
OxaloacetateAspartate
Glutamate
Most AAs
Argininosuccinate
Citrulline
Carbamoyl phosphate
Ornithine
Urea
H2O
Arginine
α-Ketoglutarate
α-Keto acid
Most AAs
Glutamate
α-KG
α-Keto acid
α-KG
NH4+
Fatty acid
Fatty acyl-CoA
Fatty acyl carnitine
Fatty acyl-CoA
Fatty acyl-CoAC-2Δ2 trans enoyl CoA
L-3-hydroxyacyl CoA
β-keto fatty acyl CoA
Acetyl-CoA
6-P-Gluconolactone6-P-Gluconate
Ribulose-5-PRibose-5-P
Glyceraldehyde-3-P
Xylulose-5-P
Sedohetulose-7-P
Erythrose-4-P
Hexokinase
Phosphoglucose isomerase
Phosphofructokinase
Aldolase
Triose phosphateisomeraseGlyceraldehyde
-3-P DH
Phosphoglycerate kinase
Phosphoglycerate mutase
Enolase
Pyruvate kinase(AR hemolytic anemia)
Pyruvate DH
Pyruvate DH
Dihydrolipoyltransacetylase
Dihydrolipoyl DH
Citrate synthase
Aconitase
Aconitase
Isocitrate DH
α-KG DH
Succinyl-CoA Synthetase
Succinate DH(aka ETC Complex II)
Fumarase
Malate DH
Fructose-1,6-biphosphatase
Glucose-6-phosphatase
Phosphoenolpyruvatecarboxykinase
Pyruvatecarboxylase
Ornithinetranscarbamoylase
Argininosuccinatesynthetase
Argininosuccinase
Arginase
Carbamoyl phosphatesynthetase
Acyl-CoA synthetase
Acyl-CoA DH
Δ2 Enoyl-CoA hydratase
L(+)-3-hydroxyacyl-CoA DH
Thiolase
Glucose-6-P DH(X hemolytic anemia)
Lactonase
6-P-gluconate DHPhospho-pentoseisomerase
Phosphopentoseepimerase
Transketolase
Transketolase
Transaldolase
Glutamate DH
Galactose-1-PFructose-2,6-bisphosphate
2,3-Bisphosphoglycerate
Glucose-1-P
Sorbitol Fructose
GalactoseGalactokinsase
(m
ild galactosemia)
Gal-1-P URIDYLTRANSFERASE
(severe galactosemia)
Fructose
Fructose
Ketone bodies
Orotic acid
UMP
UDP
dUDPCTP
PRPP
IMP
AMP GMP
Ribose-5-P
dUMP
dTMP
THF
DHF
Acetoacetate
β-hydroxybuterate
Acetoacetate Acetoacetyl-CoA
β-hydroxybuterate
Methylmalonyl-CoA
Propionyl-CoA
Odd-chain fatty acidsand branched chain amino acids: Valine Isoleucine Threonine Methionine
F1P
Glyceraldehyde
Fructokinase
(essential fructosuria)
Aldolase B
(fructo
se in
tolerance
)
Aldose reductase Sorbitol DH
Glucokinase in pancreatic β-cells & liver.
gestational diabetes. Acts as a glucose sensor.
Phosphofructokinase 2
Fructose bisphosphatase 2
Bisphosphoglyceratemutase
Phosphatase
Ribonucleotide Reductase
PRPP synthase
PRPPamidotransferase
Thymidylatesynthase
Propionyl-CoA carboxylase (Propionic acidemia)
Methylmalonyl-CoA isomerase (Methylmalonic acidemia)
Thiophorase
- X-linkedrecessive: buildup of carbamoyl phosphate -> increased orotic acid w/ hyperammonemia (vs. ortic aciduria)
Purine base production orreuse from salvage pathway.De novo requires aspartate,glycine, glutamine, and THF.
Orotic aciduria (AR) - can’t convert ortic acid to UMP due to a defect in orotic acid phosphoribosyltransferase or orotidine 5’-phosphate decarboxylase.
NO hyperammonemia (vs OTC
in urine, megaloblastic anemia that doesn’t improve with B12 or folic acid.
+allosteric activator ofgluconeogenesis
lysine and leucine (the only two pure ketogenic AA)
Used by RBCs to make 2,3-BPGused in hemoglobin. Bypasses ATP production.
B 5 -
Pantothenic
a
cid (CoA)
B
BMITOCHONDRIA
2 Acetyl-CoA
Succinyl-CoA Succinate
No mitochondria in RBCsso they can’t use ketones for energy.
B1
B1
B6
B1
B1
B12
VITAMINSB1 (Thiamine) - α-KG DH Transketolase Pyruvate DH
B2+) - Succinate DH
Pyruvate DH (via Dihydrolipoyl DH) Acyl-CoA DH
(Pyridoxine) - Transamination rxn - also used in synth of cystathionine, heme, niacin, GABA, histamine,dopamine
Poor feeding, vomiting, hypotonia,lethargy, dehydration, ANION GAPACIDOSIS.
Maple syrup disease?Requires all the cofactors of pyruvate DH?
N-acetylglutamate
Insulin
Glucagon
Hydroxyurea
Creatinine NO
6-mercaptopurine
DihydrofolatereductaseMethotrexate
(Trimethoprim inbacteria)
+Alosteric activator of carbamoyl phosphatesyntetase
Medium chain acyl-CoA dehydrogenase
- Hypoglycemia - Hypoketonemia - Hyperammonemia - decreased ATP leads to shut down of urea cycle
Skeletal muscle carnitine:
- Myoglobinemia - Weakness following exercise - Elevated muscle triglycerides (oil droplets in muscle on histo) - Hypoketonemia
B5 - Pantothenic acid (CoA)
32 ATP via malate-aspartate shuttle (liver and heart)30 ATP via glycerol-3-phosphate shuttle (muscle)
Mannose
Hexokinase