A structural survey of metal⋯π heteroaromatic supramolecular synthons for metal = tellurium, tin,...
Transcript of A structural survey of metal⋯π heteroaromatic supramolecular synthons for metal = tellurium, tin,...
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A structural survey of metal/p heteroaromatic supramolecular synthons formetal ¼ tellurium, tin, and gold†
Edward R. T. Tiekink*ab and Julio Zukerman-Schpector*a
Received 26th May 2009, Accepted 24th July 2009
First published as an Advance Article on the web 17th August 2009
DOI: 10.1039/b910209d
A survey of tellurium, tin and gold structures containing metal/p heteroaromatic interactions has
been conducted, and their occurrence correlated with previously described metal/p aryl interactions.
Metal/p heteroaromatic interactions are found for all three metals when the heteroaromatic ring was
a pyridine/pyridine-derivative, and these contacts lead usually to 0-D or 1-D aggregates with rare
examples of 2-D and 3-D architectures. For each of tellurium and tin, metal/p aryl interactions are
more likely to form over metal/p pyridine interactions, while the reverse is true in the case of gold.
These observations are readily correlated with the influence of increasing electron density in the
pyridine compared with an aryl ring. In the case of tellurium and tin, for which the metal/p
interaction involves a metal-based lone pair of electrons being donated to the LUMO of the aryl group,
increasing the electron density of the aromatic ring naturally decreases the probability of forming this
type of interaction. In the case of gold, where the metal/p interaction involves the donation of electron
density from the aromatic ring to the gold centre, increasing the electron density of the aromatic ring
favours such an interaction. At least for the metals surveyed, metal/p interactions are observed in
a significant number of their crystal structures, for example up to 6% of all tellurium structures feature
Te/p aryl interactions as a supramolecular synthon.
Introduction
The pivotal role of hydrogen bonding interactions in stabilising
crystal structures is beyond dispute. This being stated, there are
examples in the crystallographic literature, involving the ubiq-
uitous carboxylic acid functional group, whereby the combina-
tion of a large number of nominally weaker interactions is
sufficient to overcome expected hydrogen bonding interactions.
An example of this phenomenon was reported recently for the
polymorphic 2:1 co-crystal formed between 4-hydroxybenzoic
acid and 2,3,5,6-tetramethylpyrazine.1 In one polymorphic form,
the eight-membered carboxylic acid dimer {/H–O–C]O}2
synthon was formed and molecules were linked into supramo-
lecular chains via hydroxyl-O–H/Npyridine hydrogen bonds. By
contrast, in the second form, a 2-D array was formed comprising
zig-zag rows of 4-hydroxybenzoic acid molecules connected via
carbonyl-O/H–Ohydroxyl hydrogen bonds, with the rows
bridged by 2,3,5,6-tetramethylpyrazine molecules that form
carboxylic acid-O–H/Npyridine hydrogen bonds. Thus, in this
form, the anticipated hierarchy of hydrogen bonding was fol-
lowed but not in former, metastable form.1 Keeping to the
carboxylic theme but in the domain of metallorganic structures,
the polymorphic Cy3PAu(SC5H4CO2H-2) system when
aUniversidade Federal de Sao Carlos, Laborat�orio de Cristalografia,Estereodinamica e Modelagem Molecular, Departamento de Quımica,C.P. 676, Sao Carlos, SP, 13565-905, Brazil. E-mail: [email protected]; Fax: +55 16 3351 8350; Tel: +55 16 3351 8208bSchool of Materials Science And Engineering, Nanyang TechnologicalUniversity, Singapore 639798. E-mail: [email protected];Fax: +65 6790 9801; Tel: +65 6790 6402
† Electronic supplementary information (ESI) available: Structuralinformation on the compounds studied. See DOI: 10.1039/b910209d
This journal is ª The Royal Society of Chemistry 2009
re-crystallised from ethylacetate, EtOH, MeOH or DMSO
solutions concomitantly deposited two forms, i.e. one adopting
an extended dimeric structure with the {/H–O–C]O}2 synthon
linking two molecules and another form adopting a more
compact spherical monomeric arrangement with intramolecular
O–H/S hydrogen bonds.2 Here, the expected carboxylate dimer
has been circumvented by intramolecular O–H/S hydrogen
bonds. The principle that eight-membered carboxylic acid dimer
is not always observed in organic crystal structures where it can
potentially form has been thoroughly analysed by Zaworokto
et al.,3 building upon an earlier bibliographic survey.4 It was
reported that the dimer synthon occurred in only 31% of struc-
tures where it can potentially form. However, when structures
with competing hydrogen bonding sites are removed, the
occurrence increases to 93%.3
Another example of similar frustration, at least from the
perspective of the rational design of a crystal structure, is found
in the polymorphic organotellurium system, (p–MeOC6H4)-
Te{C[ ¼ C(H)Cl][c–C(OH)(CH2)5]Cl2.5 Each of the two forms
self-associates into a supramolecular aggregate. In one form,
a dimeric unit is sustained by an eight-membered {Cl/H–O–
Te}2 homosynthon where each cyclohexyl-bound hydroxyl
group forms an O–H/Cl hydrogen bond to one of the tellurium-
bound chloride atoms of a centrosymmetrically related molecule.
In the second form, a six-membered {/H–O–Te/Cl–Te–Cl}
heterosynthon is formed instead, whereby one hydroxyl O–H/Cl hydrogen bond is substituted by a secondary Te/Cl bond so
that a zig-zag supramolecular chain results.5 In each of the
foregoing, identical chemical compositions give rise to quite
distinct packing arrangements sustained by alternate supramo-
lecular synthons and, without the intervention of lattice solvent
molecules, are examples of supramolecular isomers.6 In order for
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a ‘‘favoured’’ mode of association to be replaced by another,
ostensibly less favoured synthon, compensatory intermolecular
interactions presumably exist in order to provide a comparable
energy of stabilisation to the overall crystal structure. Such
considerations have given rise to an on-going search of alterna-
tive ‘‘non-conventional’’ supramolecular synthons.
Over the years, investigations in structural macromolecular
chemistry have inspired the discovery and understanding of
several non-conventional non-covalent interactions such as
C–H/O, C–H/p, and cation/p interactions,7–12 which
complement C–H/X, C-X/X and C-X/p (X ¼ F, Cl, Br, and
I) interactions established largely from the crystallographic liter-
ature.13–19 Another non-covalent interaction gaining increasing
attention are lone pair/p interactions, which also emerged from
evaluating protein structures.20–22 Recently, the prevalence of lone
Scheme 1 Geometric parameters defining the intermolecular M/p
interactions covered in this survey with the pyridine ring used as an
exemplar for the heteroaromatic ring.
Scheme 2 Chemical
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pair/p interactions in molecular compounds have been surveyed
with the observations that these are i) not uncommon in organic
crystal structures, and ii) largely go unrecognised in the primary
literature.23 Lone pair/p interactions whereupon the lone pair
resides on a metal centre, e.g. tellurium24 and tin,25 have also be
reviewed in recent years. Along with the organic examples where
these contacts pertain, lone pair/p interactions arise from the
interaction of the interacting lone pair with the LUMO of an
aromatic ring.22 Perhaps even more intriguing are the recently
reviewed Au/p aryl interactions as supramolecular synthons
where the interaction is between the electron deficient gold atom
and the electron-rich phenyl group.26 In their survey of lone
pair/p interactions, Mooibroek et al. made the point that
increasing the electron density in the rings, e.g. by substituting
a carbon atom with a nitrogen atom, must influence the nature of
the interaction.23 This issue is addressed in the present commu-
nication in the context of tellurium, tin and gold structures.
Herein, the prevalence of metal/p interactions is surveyed
where the metal is tellurium, tin and gold, and where the
p-system is a pyridine ring, or a member of the isomeric series of
di-, tri- and tetra-nitrogen substituted rings, as well as their
oxygen and sulfur analogues, where they exist. The hypothesis
being tested is based on electronic grounds in that enhancing the
electron density of the p-system in the heteroaromatic ring
should diminish the likelihood of forming tellurium/p and
tin/p interactions but, conversely, should increase the likeli-
hood of gold/p heteroaromatic interactions.
structures of 1–6.
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Results
Preamble
The following study builds on earlier contributions describing
Te/p,24 Sn/p,25 and, more recently, Au/p interactions,26 and
similar protocols are employed herein. The Cambridge Struc-
tural Database (CSD version 5.30, February 2009)27 was
searched using CONQUEST (version 1.11).28 The search was
performed in order to find structures that match the fragment
shown in Scheme 1, or derivatives where the nitrogen is
substituted by oxygen or sulfur atoms. In addition, searches were
conducted for the isomeric two, three and four nitrogen-,
oxygen- or sulfur-containing species. The two restrictions
applied to each search were that i) the distance between the
centroid of the heteroaromatic ring and the metal centre (d) be
Table 1 Geometric descriptors for the intermolecular Te/p pyridineand Sn/p pyridine interactions in 1–6
Compound Number d/�A a/� Ref.
Te/p pyridine1 3.81 17.2 342 3.94 19.5 353 3.98 15.4 36Sn/p pyridine4 3.72 10.1 375 3.87 3.5 386 3.87 16.7 37
Fig. 1 Supramolecular association mediated by Te/p pyridine inter-
actions leading to supramolecular chains with helical (1), zig-zag (2), and
linear (3) topologies, respectively. Colour codes in this and remaining
diagrams: metal, orange; halide, cyan; sulfur, yellow; oxygen, red;
nitrogen, blue; and carbon, grey. The M/p contacts are emphasised as
purple dashed lines. For reasons of clarity, hydrogen atoms are omitted.
This journal is ª The Royal Society of Chemistry 2009
equal or less than 4.0 A, and ii) that the angle, a, defined by the
vector perpendicular to the heteroaromatic ring (V1) and the
vector passing through the centroid to the metal atom (V2), be
equal or less than 20�. The 4.0 A cut-off was chosen based on the
sum of the phenyl ring half-thickness of 1.7–1.9 A, being half the
centroid-centroid distance in parallel phenyl rings,29 and the van
der Waals radii of the metal in question, tellurium (2.06 A30), tin
(2.17 A30) and gold (1.85 A31). The generous value of 4.0 A was
calculated to capture all potential metal/p interactions. Manual
sorting was conducted to exclude aggregates sustained by other
supramolecular synthons which take precedence over a supposed
metal/p contact. As with earlier contributions in this area,24–26
the emphasis of the following description is upon identifying
metal/p interactions linking molecules, rather than performing
a detailed analysis of the overall crystal packing. Structure
analyses and interpretation were conducted with the aid of
PLATON32 and original diagrams were drawn with the
DIAMOND programme.33
Fig. 2 Supramolecular association mediated by Sn/p pyridine inter-
actions in (5) leading to a 0-D dimeric aggregate, in (4) associating with
the exposed tin atoms of the polymeric backbone, and in (6) leading to
a 2-D array.
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Te/p heteroaromatic interactions
The original bibliographic review of Te/p aryl interactions
described 48 structures, of which 45 featured intermolecular Te/p aryl interactions leading to 0-, 1- and 2-D supramolecular
Scheme 3 Chemical structures of 7–24; species not particip
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aggregates.24 Since the appearance of that publication, an addi-
tional 50 structures featuring intermolecular Te/p aryl inter-
actions have appeared in the literature. A search for
intermolecular Te/p heteroaromatic interactions containing at
ating in Au/p pyridine interactions are shown in blue.
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least one nitrogen atom revealed only three structures; no other
structures featuring the heteroaromatic rings specified above
were available in the CSD.27 Chemical structures for the three
‘‘hits’’, i.e. 1–3,34–36 are shown in Scheme 2 and geometric
parameters describing the contacts are given in Table 1. Each of
1–3 self-associates to form supramolecular chains with helical,
zig-zag and linear topologies, respectively, Fig. 1. In the case of
each of 1 and 2, the chains are sustained by one donor- and one
acceptor- Te/p interaction by each molecule, and in dinuclear
3, each molecule forms two donor- and two acceptor- Te/p
interactions. The values of d in 1–3 range from 3.81 to 3.98 A
which correspond to values at the upper end of the comparable
range for Te/p aryl interactions, i.e. 2.98–4.00 A, with a mean
value of 3.73 A.24
Sn/p heteroaromatic interactions
The original compilation of Sn/p aryl interactions described 22
structures leading to 0-, 1- and 2-D aggregation patterns,25 and
since the preparation of that survey, two additional structures
stabilised by Sn/p aryl contacts have appeared in the CSD.27 A
search for intermolecular Sn/p heteroaromatic interactions
again revealed only three structures. Chemical structures for
these, i.e. 4–6,37,38 are shown in Scheme 2, geometric parameters
describing the contacts are given in Table 1, and molecular
diagrams are shown in Fig. 2. Compound 5 exists as a dimeric
aggregate sustained by a pair of donor- and acceptor- interac-
tions. Structures 4 and 6 are based on polymeric chains whereby
the tin atoms are bridged by oxalate ligands. In 4, 2,20-bipyridyl
ligands are associated with the chain via Sn/p pyridine inter-
actions involving one pyridine residue only. In 6, the pyridine
residues participating in the Sn/p contacts are derived from the
Table 2 Geometric descriptors for the intermolecular Au/p pyridineinteractions in 7–24
Compound Number d/�A a/� Motif Ref.
7 3.44 4.7 chain 398 3.46 8.0 dimer 409a 3.46 17.9 dimer 41
3.48 6.6 dimer10 3.48 3.4 chain 4211 3.49 19.1 chain 4312 3.51 17.3 dimer 4413 3.53 9.3 dimer 4514 3.55 11.9 dimer 4615b 3.62 10.2 chain 4716 3.63 19.1 dimer 4817 3.64 16.0 chain 4918 3.66 8.5 dimer 5019 3.69 19.3 monomer 5120 3.70 18.8 dimer 4721 3.73 10.3 3-D 52
3.90 15.23.91 16.83.98 11.0
22 3.73 16.6 chain 5323 3.80 11.8 chain 54
3.88 16.224 4.00 5.5 dimer 55
3.99 10.6
a Two independent molecules in the asymmetric unit. b Molecule has2-fold symmetry.
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coordinated 1,10-phenathroline residues. The polymeric chains
interdigitate to form a 2-D array sustained by the Sn/p heter-
oaromatic contacts. The d values for 4–6 range from to
3.72 – 3.87 A, and, as for the tellurium compounds, these are
at the upper end of the range for Sn/p aryl interactions, i.e.
3.25–3.97 A, with a mean value of 3.69 A.25
Au/p heteroaromatic interactions
In stark contrast to the foregoing, there are significantly more
structures featuring Au/p heteroaromatic interactions in the
Fig. 3 Supramolecular association mediated by Au/p pyridine inter-
actions involving gold-containing anions: (19) leading to a 0-D aggregate;
(23) leading to a linear supramolecular chain; (10) leading to 0-D
aggregates that are associated into a linear supramolecular chain via
Au/p interactions where the p-system is a five-membered AuN2CS
chelate; and (7) leading to 0-D aggregates that are associated into a linear
supramolecular chain via additional Au/p interactions where the
p-system is a five-membered AuNC2N chelate.
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literature. There is also a broader representation of p-systems
with 18 structures having Au/p pyridine contacts, four with
Au/p pyrimidine, one with Au/p pyrazine, a sole example of
a structure with a Au/p 1,4-dithiine contact and one with
a Au/p thiopyran contact.
Chemical structures for the species participating in Au/p
pyridine contacts, 7–24,39–55 are shown in Scheme 3 and
geometric parameters characterising these contacts are collated
in Table 2. Seven of the 18 structures feature gold(I) centres and
the remaining have gold(III). For the gold(I) structures, six are
cationic and one anionic, while for the gold(III), neutral (four),
cationic (four) and anionic (three) species are represented. While
it is noted that such variations in oxidation state and charge was
found in the survey of Au/p aryl interactions,26 there is a clear
predominance of cationic species forming Au/p pyridine
contacts. This observation is consistent with the enhanced elec-
tron density in the pyridine versus phenyl rings. What might be
unexpected is the appearance of Au/p pyridine contacts in the
anionic gold(I), 10,42 and anionic gold(III) species, 7,39 1951 and
23.54 In two structures, i.e. 19 and 23, containing gold(III)
anions, the pyridine ring is protonated and so the interactions
may be considered as electrostatic in nature to generate 0-D and
1-D aggregates, respectively, Fig. 3. While a plausible explana-
tion emerges for 19 and 23, the situation is less clear cut for the
gold(I), 10, and gold(III), 7, species. In 10, the Au/p contact
occurs between the gold atom of an [AuCl2]� anion and a pyri-
dine ring incorporated within a ligand bound to a gold(III) centre
within a cation. The structure of 10 also reveals another type of
Au/p contact where the p-system is derived from a five-
Fig. 4 Supramolecular association mediated by Au/p pyridine interaction
aggregate; and (11) leading to a linear supramolecular chain. (9b) Dimeric unit
is a five-membered AuN2CS chelate.
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membered AuN2CS chelate; d ¼ 3.40 A and a ¼ 3.7�. The
resulting supramolecular aggregate is a linear chain that resem-
bles 23, Fig. 3. A search of the CSD revealed a similar interaction
operating in two other structures, one described below, i.e. 9,41
and one other.56 In both examples,41,56 the interacting gold atom
is integrated into the chelate ring, rather than a part of a second
molecule. The gold(III) species, 7, also features an additional
type of Au/p contact, i.e. a five membered AuNC2N chelate
ring; d ¼ 3.62 A and a ¼ 16.4�. The anions are interspersed
between cations to form a supramolecular chain, as shown in
Fig. 3. A search of the CSD revealed an additional seven struc-
tures with similar Au/p AuNC2N contacts, including structure
1749 to be described below.
The advantage of a positively charged gold centre in forming
Au/p pyridine contacts is seen in the structure of [Au(pyr-
idine)2][AuCl2] (8)39 which shows the self-association between
cations to form a dimer, Fig. 4. Similar contacts leading to
dimeric units are seen in the closely related gold(I) structures of
13,45 14,46 16,48 and 18.50 Analogous contacts but extending in
two-dimensions are found in the structure of 11,43 Fig. 4, and in
the ten gold atom highly twisted molecule 21,52 there are four
donor and four acceptor Au/p pyridine contacts with neigh-
bouring molecules that results in a 3-D arrangement.
The remaining cationic gold(III) structures to be described
have additional Au/p interactions in their crystal structures. In
9,41 which comprises two independent molecules in the asym-
metric unit, a pair of centrosymmetrically related molecules form
a dimer as shown in Fig. 4. The second independent molecule,
too, self-associates but via an aurophilic interaction (3.5606(5) A)
s in the structures of: (8) leading to a 0-D aggregate; (9a) leading to 0-D
that is associated via Au/Au and Au/p interactions where the p-system
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supported by Au/p interactions, where the p-system is
a AuN2CS chelate (see above), Fig. 4; d ¼ 3.64 A and a ¼ 17.9�.
Dimers sustained by a single Au/p pyridine contact are found
in the structure of 22.53 An additional link between the molecules
comprising the dimeric unit are provided by two Au/p inter-
actions where the p-system is a five-membered AuC3N ring
{d ¼ 3.76 A and a ¼ 18.6�} and a five membered AuSC2S
ring{d ¼ 3.74 A and a ¼ 15.9�}. The latter interactions are
also formed between dimeric units {d ¼ 3.60 A and a ¼ 5.7�;
d ¼ 3.61 A and a ¼ 6.3�} to result in the formation of a supra-
molecular chain, Fig. 5. The Au/p AuSC2S and Au/p AuC3N
interactions are arranged in a linear fashion through the chain
and are probably the dominant supramolecular synthons.
However, the structure was retained in the analysis to emphasise
the importance of the Au/p chelate interactions. A search of the
CSD revealed an additional five crystal structures with Au/p
AuC3N contacts conforming to the d # 4.00 A and a # 20�
criteria. There were 21 structures featuring the Au/p AuSC2S
interaction. Centrosymmetric dimers are found in the crystal
structure of 17.49 The dimers are connected into a supramolec-
ular chain by Au/p AuNC2N contacts {d ¼ 3.65 A and
a ¼ 17.6�}, discussed above, as well as apparently by Au/p
Fig. 5 Supramolecular association mediated by Au/p pyridine and
additional Au/p interactions leading to supramolecular chains in the
structures of: (22) where the additional p-systems are a five-membered
AuNC3 chelate and a five-membered AuSC2S chelate; and (17) where the
additional p-systems are a five-membered AuNC2N chelate and a four-
membered AuO2Au hetero ring.
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AuO2Au contacts {d ¼ 3.56 A and a ¼ 18.5�}. There are no
additional literature examples for such Au/p AuO2Au
contacts.
While the previous discussion has largely focussed upon
charged gold species, this is not the sole criterion for the
formation of Au/p pyridine contacts as neutral gold(III), i.e.
12,45 15,48 20,48 and 24,56 compounds also feature this type of
interaction. Each of the compounds 12, 20 and 24 forms
a centrosymmetric dimer, as the gold atom participates in a single
Au/p pyridine contact. By contrast, in 15, where the gold atoms
lies on a 2-fold axis, each gold atom participates in two Au/p
pyridine contacts resulting in the formation of a supramolecular
chain.
A comparison of the d values for compounds featuring Au/p
aryl or pyridine interactions is instructive. The range of d for all
structures with Au/p aryl interactions was reported to be
3.28–4.00 A (4.00 A was the limit of the search) and this is
comparable to the range of d for Au/p pyridine of 3.46–4.00 A.
However, in the latter case, one example has d ¼ 4.00 A with the
remaining structures having d # 3.80 A. This is reflected in the
average value of d for the Au/p pyridine series of 3.63 A which is
shorter than 3.75 A, the average value of d for the Au/p aryl series.
Four crystal structures were found containing Au/p pyrim-
idine interactions, 25–28,57–59 and chemical structures and
geometric data for these are given in Scheme 4 and Table 3,
respectively. Two of the structures, i.e. gold(I) species 25,57 Fig. 6,
and 28,57 feature a single contact between the gold atom of
a [Au(CN)2]� anion and a pyrimidine ring. As discussed above
for pyridinium systems, a driving force for such interactions
involving the [Au(CN)2]� anion is the protonation of the
pyrimidine ring. Charged species are also found in the remaining
two structures. In 26,58 the gold(III) centre in [AuBr4]� is sand-
wiched between pyrimidine rings to form a supramolecular chain
akin to the structure of 23 shown in Fig. 3. In this structure, the
five-membered azolinium ring is probably precluded from
forming Au/p interactions owing to steric congestion. In the
binuclear compound 27,59 Au/p pyrimidine interactions lead to
a supramolecular chain generated by a crystallographic 4-fold
screw axis, Fig. 6.
In the sole example of a structure featuring a Au/p pyrazine
interaction, 2960 (Scheme 4 and Table 3), also forms a Au/p 1,
4-dithiine contact, again the only example of such an interaction.
A supramolecular chain with a zig-zag topology is formed,
Fig. 7. Each gold atom bridges symmetry independent molecules,
one via a Au/p pyrazine interaction and the other via a Au/p
1,4-dithiine interaction. The final structure to be described is the
only example of a supramolecular aggregate, a dimer in this case
as shown in Fig. 8, sustained by a Au/p thiopyran interaction;
this is the sole example of a structure containing gold and a thi-
opyran ring.
Discussion
In the on-going quest for delineating non-conventional supra-
molecular synthons, metal/p interactions are increasingly being
recognised having some significance in stabilising their crystal
structures. Previous systematic analyses of crystal packing
patterns in tellurium,24 tin25 and gold26 compounds have shown
that some supramolecular aggregates are sustained by metal/p
CrystEngComm, 2009, 11, 2701–2711 | 2707
Scheme 4 Chemical structures of 25–30; species not participating in Au/p heteroaromatic interactions are shown in blue.
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aryl interactions. While lone pair/p interactions operating in
the structures of tellurium and tin has parallels in structures of
organic molecules,23 gold/p aryl interactions do not.26 It is
likely that gold/p aryl interactions arise from electron donation
from an electron-rich heteroaromatic group to an electron defi-
cient gold atom. If true, increasing the electron density of the
aromatic ring, e.g. by introducing a pyridine-nitrogen atom,
might be expected to promote such supramolecular synthons.
Also, when formed, the gold/p pyridine interactions should be
stronger than analogous gold/p aryl contacts.
2708 | CrystEngComm, 2009, 11, 2701–2711
While determining the strength of a gold/p pyridine interaction
is beyond the scope of the present survey, it is noted that the average
d value for gold/p pyridine is shorter than for gold/p aryl inter-
actions (3.63 vs 3.75 A). If this distance criterion is an indicator of the
strength of the interaction, when formed, Au/p pyridine interac-
tions are stronger than Au/p aryl interactions. However, as
a cautionary note see, for example, discussions on the relationship
between distance and strength of weak intermolecular interac-
tions.62–65 As for the previous survey of Au/p aryl interactions,26
there is no apparent correlation between the magnitude of d and a.
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Table 3 Geometric descriptors for the intermolecular Au/p pyrimidine(25–28), Au/p pyrazine (29), Au/p 1,4-dithiine (29) and Au/p thi-opyran (30) interactions
Compound Number d/�A a/� Motif Ref.
Au/p pyrimidine25 3.66 16.8 monomer 5726 3.67 13.9 chain 58
3.86 15.927 3.73 12.3 chain 5928 3.77 18.4 monomer 57Au/p pyrazine29 3.66 18.8 chain 60Au/p 1,4-dithiine29 3.48 4.9 chain 60Au/p thiopyran30 3.65 10.3 dimer 61
Fig. 6 Supramolecular association mediated by Au/p pyrimidine interactio
chain.
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It is salutatory to consider the prevalence of gold/p inter-
actions. There are 3073 structures containing gold with at least
one aryl ring compared to 565 containing gold and at least one
pyridine ring. Given that gold/p aryl interactions are found in
58 structures and gold/p pyridine in 18 structures, the proba-
bility of forming a gold/p aryl interaction is 53 to 1 compared
to 31 to 1 for gold/p pyridine interactions. The probability for
forming gold/p aryl interactions is most certainly over-
estimated as many gold compounds, for example, contain tri-
phenylphosphine groups so that the number of phenyl groups
available to form gold/p aryl interactions is far greater than
indicated above; i.e. there are 1579 structures having at least one
Au-PPh3 unit. For comparison, similar searches were performed
for tellurium and tin. For tellurium, tellurium/p aryl interac-
tions can potentially occur in 964 structures and in fact occur in
ns: (25) leading to a 0-D aggregate; and (27) leading to a supramolecular
CrystEngComm, 2009, 11, 2701–2711 | 2709
Fig. 7 Two views of the supramolecular chain mediated by Au/p
pyrazine and Au/p 1,4-dithiine interactions in (29).
Fig. 8 Dimer formation mediated by Au/p thiopyran interactions in
(30).
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one out of every 16 structures whereas the probability of forming
tellurium/p pyridine interactions drops significantly to one out
of every 33 structures, there being a total of 56 structures having
both tellurium and at least one pyridine ring. For tin, there are
5049 and 851 structures having at least one aryl or one pyridine
ring, respectively. The probability of forming tin/p interactions
are one out of every 202 structures (aryl) and one out of every 284
structures (pyridine).
From the foregoing, it appears that tellurium and tin
compounds are more likely to form metal/p aryl interactions
over metal/p pyridine interactions, whereas the opposite is true
for gold. Of the three elements, tellurium is more likely to form
tellurium/p aryl interactions, a result possibly correlated with
the presence of two lone pairs of available for forming such
interactions in tellurium(II) compounds.
Conclusions
Supramolecular synthons based on metal/p pyridine interac-
tions are found in tellurium, tin and gold structures leading to 0-
D, 1-D, less commonly 2-D, and rarely 3-D supramolecular
architectures. Metal/p pyridine interactions are more likely to
be found in gold structures compared to tellurium and tin
structures. For gold compounds, gold/p pyridine interactions
are more probably formed compared to gold/p aryl contacts.
2710 | CrystEngComm, 2009, 11, 2701–2711
These trends are consistent with the expected mode of interaction
between the respective metal centre and the (hetero)aromatic
ring. Generally speaking, the formation of metal/p aryl/pyri-
dine interactions appear in a small but significant fraction of
structures, e.g. up to 6% of tellurium structures feature tellu-
rium/p aryl interactions, but, when present, these interactions
clearly contribute to the overall stability of the crystal structure.
Finally, the survey of gold structures herein reveals the possi-
bility of metal/p chelate ring interactions, to complement
C–H/p chelate ring interactions that have emerged recently as
a supramolecular synthon.66–68
Acknowledgements
We thank CNPq, CAPES and FAPESP (Brazil) for support of
this work.
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