ANALYTICAL PERFORMANCE CHARACTERISTICS OF A … · analytical performance characteristics of a...

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BACE-1 immunoassay principle ANALYTICAL PERFORMANCE CHARACTERISTICS OF A NOVEL IMMUNOASSAY FOR QUANTIFICATION OF BACE-1 IN HUMAN CEREBROSPINAL FLUID Emeric CHASSAING 1 , Mélanie BODNAR-WACHTEL 1 , Tanja SCHUBERT 1 , Hugo VANDERSTICHELE 2 , Erik STOOPS 2 , and Philippe VERGNAUD 1 1 Bioclinica LAB, Lyon, France 2 ADx NeuroSciences, Gent, Belgium Accumulation of amyloid-β (Aβ) into plaques in the brain is one of the hallmarks of Alzheimer’s Disease (AD). This neurotoxic peptide is produced by the consecutive cleavage of amyloid precursor protein (APP) by β-site APP Cleaving Enzyme 1 (BACE1) and γ-secretase. Due to its key role in amyloid plaque formation, BACE-1 is considered as a major therapeutic target for reducing the levels of amyloid in AD brain. The BACE1 ELISA quantifies specifically BACE-1 protein. In contrast to BACE-1 enzyme activity assays, it does not suffer from a BACE-2 interference. This study documents the analytical performance characteristics of a novel ELISA for BACE-1 protein in human cerebrospinal fluid. I NTRODUCTION M ETHOD BACE-1 protein (Size: 55.8 kDa) is quantified in human CSF with a (manual) sandwich ELISA, developed by ADx NeuroSciences (Gent, Belgium), and commercialized by EUROIMMUN (Lübeck, Germany). The Bioclinica LAB analytical validation method is designed to ensure the accuracy and reliability of the results. The validation process, the criteria applied, and the parameters chosen are optimized based on current guidelines, field experience and performance requirements. The Laboratory is CAP accredited (College of American Pathologists). The CSF samples for the study are provided by 2 different centers (Cerba Specimen & AMS bio). All CSF samples were stored at -70 ° C. The sample concentration determination is based upon duplicate analysis. LoBind tubes from Eppendorf were used (ref. 0030108094) for every step in the handling of CSF. The BACE-1 colorimetric ELISA shows acceptable analytical performance characteristics, such as good repeatability and reproducibility of the results. Samples can be diluted until 1:8 without showing any matrix interference. The samples tested fall within the dynamic range of the assay. BACE-1 remains stable after 4 freeze/thaw cycles and 24 hours at room temperature or +4°C. This novel assay meets all internal acceptance criteria for CSF samples testing and represents an additional tool for patient management in research clinical trials. T AKE H OME M ESSAGE P ARALLELISM AND S PIKE R ECOVERY A CCEPTABLE R ECOVERY R ANGE : 80 - 120% Alzheimer's Association International Conference | July 16 – 20 , 2017 | London, England CSF Sample (pg/mL) Calibrator (pg/mL) Expected values (pg/mL) Spiked samples (pg/mL) Recovery % R1 923 10752 3380 3 587 106% 7291 2515 2 682 107% 1076 961 900 94% 272 760 781 103% R2 2365 10752 4461 4 867 109% 7291 2731 2 699 99% 1076 2042 1 973 97% 272 1841 1 768 96% Mean 101% Six samples (FS1 – FS6) with different concentrations were diluted subsequently until 1:16 in sample buffer. The recovery percentages are then calculated as followed: Recovery % = ( ) x 100 Two CSF samples with different concentrations were spiked with 4 different concentrations of calibrators in a 75:25 ratio (sample:calibrator). The assay value is then compared to the expected value. QC1 QC2 QC3 QC4 QC5 Target (pg/mL) 300 480 1500 2400 4500 Inter CV% 8.0 10.9 4.6 7.1 4.6 Intra CV% 4.7 4.2 4.8 4.5 2.1 Five Quality Control (QC) samples covering the dynamic range of the assay (272 – 10752 pg/mL) were used to determine the Intra-Assay variation. QCs were repeated 16 times. For the Inter-Assay variation, QCs were measured in 5 different assays on 5 different days. 272 1076 2148 3830 5561 7291 10752 0.0 0.2 0.4 0.6 0.8 1.0 1.2 1.4 1.6 1.8 2.0 1 10 100 1000 10000 Optical Density CSF-BACE-1 (pg/mL) concentration range of tested CSF Limit of Detection 29.2 pg/mL Lower Limit of Quantitation 272 pg/mL Upper Limit of Quantitation 10752 pg/mL 272 pg/mL (first Calibrator) LLOQ was determined with three CSF samples with low values and was measured at least 13 times within the same run. The lowest mean concentration with a CV% between 15 and 20% should be considered as the lower limit of quantitation. 29.2 pg/mL LOD were determined by adding two SD (standard deviation) to the mean optical density (OD) of 24 replicates of the sample buffer. The concentration is then back- calculated with the equation of the curve. S AMPLE STABILITY M AXIMUM T OLERATED FROM R EFERENCE V ALUE : ± 15% Six CSF samples with different concentrations were thawed and placed 3, 6 and 24 hours at ambient temperature (+22 ° C ± 2 °C) or in a fridge (+4 ° C ± 2° C). For each time point, the levels of BACE-1 were determined the same day on the same run, and the results were compared to the reference value (T0). Six CSF samples were consecutively thawed and frozen 4 times. No effect on 4 freeze/thaw cycles was detected on BACE-1 concentrations. Percentages of variation, when compared to T0, were all below 10%. -40 -30 -20 -10 0 10 20 30 40 0 3 6 9 12 15 18 21 24 Percentage of variation from T0 time (hours) A-1 A-2 B-1 B-2 C-1 C-2 -40 -30 -20 -10 0 10 20 30 40 0 3 6 9 12 15 18 21 24 Percentage of variation from T0 time (hours) A-1 B-1 B-2 C-1 C-2 D-1 BACE-1 concentrations were back-calculated following a seven points calibration curve (4-PL curve fitting). W ORKING R ANGE & L IMITS LLOQ ≥ F IRST C ALIBRATOR | CV% from 15 to 20% P ARALLELISM S PIKE R ECOVERY I NTRA -A SSAY VARIATIONS I NTER -A SSAY VARIATIONS L OWER L IMIT O F Q UANTITATION (LLOQ) L IMIT O F D ETECTION (LOD) S TABILITY AT R OOM T EMPERATURE S TABILITY AT +4 ° C Freeze / Thaw cycles effects C ALIBRATION C URVE P RECISION AND A CCURACY M AXIMUM CV% T HRESHOLD < 15% Simultaneous incubation of sample (15μL undiluted) with biotinylated detector antibody (100μL) on antibody-coated plates. Addition of streptavidin peroxidase conjugate (100 μL). Addition of the peroxidase substrate. Stop of reaction by addition of sulfuric acid followed by reading the absorbance at the appropriate wavelength. λ Substrate 1 2 3 4 3 hours at RT & Washing steps 30 minutes at RT in the dark 30 min at RT & Washing steps 0 2000 4000 6000 0 4 8 12 16 Concentration (pg/mL) Dilution factor (1/x) Sample (%CV) FS1 (8.3) FS2 (10.2) FS3 (10.3) FS4 (9.5) FS5 (10.6) FS6 (6.5) -40% -30% -20% -10% 0% 10% 20% 30% 40% 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 Percentage of variation from the mean within run replicates QC1 QC2 QC3 QC4 QC5 -40% -30% -20% -10% 0% 10% 20% 30% 40% 0 1 2 3 4 5 6 Percentage of variation from the mean between run replicates QC1 QC2 QC3 QC4 QC5

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BACE-1 immunoassay principle

ANALYTICAL PERFORMANCE CHARACTERISTICS OF A NOVEL IMMUNOASSAY FOR QUANTIFICATION OF BACE-1 IN HUMAN CEREBROSPINAL FLUID

Emeric CHASSAING1, Mélanie BODNAR-WACHTEL1, Tanja SCHUBERT1, Hugo VANDERSTICHELE2, Erik STOOPS2, and Philippe VERGNAUD1

1Bioclinica LAB, Lyon, France 2ADx NeuroSciences, Gent, Belgium

Accumulation of amyloid-β (Aβ) into plaques in the brain is one of the hallmarks of

Alzheimer’s Disease (AD). This neurotoxic peptide is produced by the consecutive

cleavage of amyloid precursor protein (APP) by β-site APP Cleaving Enzyme 1 (BACE1)

and γ-secretase. Due to its key role in amyloid plaque formation, BACE-1 is considered

as a major therapeutic target for reducing the levels of amyloid in AD brain. The BACE1

ELISA quantifies specifically BACE-1 protein. In contrast to BACE-1 enzyme activity

assays, it does not suffer from a BACE-2 interference.

This study documents the analytical performance characteristics of a novel ELISA for

BACE-1 protein in human cerebrospinal fluid.

I N T RO D U C T I O N

M E T H O D

BACE-1 protein (Size: 55.8 kDa) is quantified in human CSF with a (manual) sandwichELISA, developed by ADx NeuroSciences (Gent, Belgium), and commercialized byEUROIMMUN (Lübeck, Germany).

The Bioclinica LAB analytical validation method is designed to ensure the accuracy andreliability of the results. The validation process, the criteria applied, and theparameters chosen are optimized based on current guidelines, field experience andperformance requirements. The Laboratory is CAP accredited (College of AmericanPathologists).

The CSF samples for the study are provided by 2 different centers (Cerba Specimen &AMS bio). All CSF samples were stored at -70°C. The sample concentrationdetermination is based upon duplicate analysis. LoBind tubes from Eppendorf wereused (ref. 0030108094) for every step in the handling of CSF.

The BACE-1 colorimetric ELISA shows acceptable analytical performance characteristics, such

as good repeatability and reproducibility of the results. Samples can be diluted until 1:8

without showing any matrix interference. The samples tested fall within the dynamic range of

the assay. BACE-1 remains stable after 4 freeze/thaw cycles and 24 hours at room temperature

or +4°C.

This novel assay meets all internal acceptance criteria for CSF samples testing and represents

an additional tool for patient management in research clinical trials.

TA K E H O M E M ES SAG E

PA R A L L E L I S M A N D S P I K E R E C O V E R Y

A C C E P T A B L E R E C O V E R Y R A N G E : 8 0 - 1 2 0 %

Alzheimer's Association International Conference | July 16 – 20 , 2017 | London, England

CSF Sample (pg/mL)

Calibrator(pg/mL)

Expectedvalues

(pg/mL)

Spikedsamples(pg/mL)

Recovery%

R1 923

10752 3380 3 587 106%

7291 2515 2 682 107%

1076 961 900 94%

272 760 781 103%

R2 2365

10752 4461 4 867 109%

7291 2731 2 699 99%

1076 2042 1 973 97%

272 1841 1 768 96%

Mean 101%

Six samples (FS1 – FS6) with different concentrations werediluted subsequently until 1:16 in sample buffer. The recoverypercentages are then calculated as followed:

Recovery % =(𝑚𝑒𝑎𝑠𝑢𝑟𝑒𝑑 𝑣𝑎𝑙𝑢𝑒 𝑋 𝑑𝑖𝑙𝑢𝑡𝑖𝑜𝑛 𝑓𝑎𝑐𝑡𝑜𝑟)

𝐸𝑥𝑝𝑒𝑐𝑡𝑒𝑑 𝑣𝑎𝑙𝑢𝑒x 100

Two CSF samples with different concentrations were spikedwith 4 different concentrations of calibrators in a 75:25 ratio(sample:calibrator). The assay value is then compared to theexpected value.

QC1 QC2 QC3 QC4 QC5

Target (pg/mL) 300 480 1500 2400 4500

Inter CV% 8.0 10.9 4.6 7.1 4.6

Intra CV% 4.7 4.2 4.8 4.5 2.1

Five Quality Control (QC) samples covering the dynamic range of theassay (272 – 10752 pg/mL) were used to determine the Intra-Assayvariation. QCs were repeated 16 times. For the Inter-Assay variation,QCs were measured in 5 different assays on 5 different days.

272

1076

2148

3830

5561

7291

10752

0.0

0.2

0.4

0.6

0.8

1.0

1.2

1.4

1.6

1.8

2.0

1 10 100 1000 10000

Op

tica

l Den

sity

CSF-BACE-1 (pg/mL) concentration range of tested CSF

Limit of Detection29.2 pg/mL

Lower Limit of Quantitation

272 pg/mL

Upper Limit ofQuantitation10752 pg/mL

272 pg/mL (first Calibrator)LLOQ was determined with three CSFsamples with low values and was measuredat least 13 times within the same run. Thelowest mean concentration with a CV%between 15 and 20% should be consideredas the lower limit of quantitation.

29.2 pg/mLLOD were determined by adding two SD(standard deviation) to the mean opticaldensity (OD) of 24 replicates of the samplebuffer. The concentration is then back-calculated with the equation of the curve.

S A M P L E S TA B I L I T Y

M A X I M U M T O L E R A T E D F R O M R E F E R E N C E V A L U E : ± 1 5 %

Six CSF samples with different concentrations were thawed and placed 3, 6 and 24 hours at ambient temperature(+22°C ± 2°C) or in a fridge (+4°C ± 2°C). For each time point, the levels of BACE-1 were determined the same day onthe same run, and the results were compared to the reference value (T0).

Six CSF samples were consecutively thawed and frozen 4 times. No effect on 4 freeze/thaw cycles was detected onBACE-1 concentrations. Percentages of variation, when compared to T0, were all below 10%.

-40

-30

-20

-10

0

10

20

30

40

0 3 6 9 12 15 18 21 24

Pe

rce

nta

ge o

f va

riat

ion

fro

m T

0

time (hours)

A-1 A-2 B-1 B-2 C-1 C-2

-40

-30

-20

-10

0

10

20

30

40

0 3 6 9 12 15 18 21 24

Pe

rce

nta

ge o

f va

riat

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fro

m T

0

time (hours)

A-1 B-1 B-2 C-1 C-2 D-1

BACE-1 concentrations were back-calculated following a seven points calibration curve (4-PL curve fitting).

W O R K I N G R A N G E & L I M I T S

L L O Q ≥ F I R S T C A L I B R A T O R | C V % f r o m 1 5 t o 2 0 %

P A R A L L E L I S M

S P I K E R E C O V E R Y

I N T R A - A S S A Y V A R I A T I O N S

I N T E R - A S S A Y V A R I A T I O N S

L O W E R L I M I T O F Q U A N T I T A T I O N ( L L O Q )

L I M I T O F D E T E C T I O N ( L O D )

S T A B I L I T Y A T R O O M T E M P E R A T U R E S T A B I L I T Y A T + 4 ° C

F r e e z e / T h a w c y c l e s e f f e c t s

C A L I B R A T I O N C U R V E

P R E C I S I O N A N D A C C U R A C Y

M A X I M U M C V % T H R E S H O L D < 1 5 %

Simultaneous incubation ofsample (15µL undiluted)with biotinylated detectorantibody (100µL) onantibody-coated plates.

Addition of streptavidinperoxidase conjugate (100µL).

Addition of the peroxidasesubstrate.

Stop of reaction by addition ofsulfuric acid followed byreading the absorbance at theappropriate wavelength.

λSubstrate

1 2 3 4

3 h

ou

rsa

t R

T &

Wa

shin

gst

ep

s

30

min

ute

s a

t R

T i

n t

he

da

rk

30

min

at

RT

& W

ash

ing

ste

ps

0

2000

4000

6000

0 4 8 12 16

Co

nce

ntr

atio

n (

pg/

mL)

Dilution factor (1/x)

Sample (%CV)FS1 (8.3) FS2 (10.2) FS3 (10.3)

FS4 (9.5) FS5 (10.6) FS6 (6.5)

-40%

-30%

-20%

-10%

0%

10%

20%

30%

40%

0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17

Pe

rce

nta

ge o

f va

riat

ion

fro

m t

he

me

an

within run replicates

QC1 QC2 QC3 QC4 QC5

-40%

-30%

-20%

-10%

0%

10%

20%

30%

40%

0 1 2 3 4 5 6P

erc

en

tage

of

vari

atio

n f

rom

th

e m

ean

between run replicates

QC1 QC2 QC3 QC4 QC5