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Page 1: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Yonina Eldar Collaboration with the groups of Prof. Moti Segev and Prof. Oren Cohen Technion – Israel Institute of Technology

Page 2: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Diffraction limit: Even a perfect optical imaging system has a resolution

limit determined by the wavelength λ The smallest observable detail is larger than ~ λ/2 This results in image smearing

100 nm

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Nano-holes as seen in

electronic microscope

Blurred image seen in

optical microscope

λ=514nm

Page 3: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

2222

)0,,(),,( 1 yx kkizezyxFTFTzyx

222 yx kk propagating waves

222 yx kk evanescent waves

field propagation (z = 0 → z > 0) Free space transfer function

Page 4: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Image from D. J. Müller et al., Pharmacol. Rev. 60,43 (2008).

E. H. Synge, Phil. Mag. 6, 356 (1928). E. A. Ash et al., Nature 237, 510 (1972). A. Lewis et al., Ultramicroscopy 13, 227 (1984). E. Betzig et al., Science 251, 1468 (1991).

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V. G. Veselago, Soviet Phys. Uspheki 10, 509 (1968). J. B. Pendry, Phys. Rev. Lett. 85, 3966 (2000). N. Fang et al., Science 308, 534 (2005). I. I. Smolyaninov et al., Science 315, 1699 (2007).

Z. Jacob et al., Opt. Exp. 14, 8247 (2006). A. Salandrino et al., Phys. Rev. B 74, 075103 (2006). Z. Liu et al., Science 315, 1686 (2007).

NSOM Superlens / Hyperlens

Page 5: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Can we recover the subwavelength data algorithmiclly from far field data? Mathematically this amounts to recovering a signal from its low pass data Standard regularization methods have not been able to yield satisfactory

results

``All methods for extrapolating bandwidth beyond the diffraction limit are known to be extremely sensitive to both:

noise in the measured data and the accuracy of the assumed a priori knowledge.”

J. W. Goodman, Introduction to Fourier Optics

Page 6: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Arises in many fields: microscopy, crystallography, astronomy, optical imaging, and more

Given an optical image illuminated by coherent light, in the far field we obtain the Fourier transform of the image

Optical measurement devices measure the photon flux, which is proportional to the magnitude squared of the field

Phase retrieval can allow direct recovery of the image

Phase importance in imaging: Hayes, Lim, Oppenheim 80

Fourier + Absolute value

2[ ] [ ]y k X k[ ]x n

Page 7: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Fourier Transform

Magnitude

Fourier Transform

Magnitude

Inverse Fourier Transform

Phase

Phase

Inverse Fourier Transform

Page 8: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Ultra-short optical pulse measurement Coherent Diffractive Imaging

Crystallography

[1] R. Trebino et al., JOSA A 10, 5 1101-1111 (1993) [2] MM Seibert et al. Nature 470, 78-81 (2011) [3] D Shechtman et al. PRL 53, 20, 1951-1952 (1984)

[1] [2]

[3]

Page 9: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Several challenges in optical imaging:

Bandwidth extrapolation

Nonlinear measurements: Phase retrieval

Exploit sparsity

Extend sparse recovery to lowpass data Nonlinear compressed sensing

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Page 10: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Bandwidth extrapolation

Phase retrieval methods

Optimality conditions for nonlinear sparse recovery

Algorithms for nonlinear sparse recovery

Extended IHT: Nonlinear Iterative hard thresholding

Extended OMP: Greedy sparse simplex

Phase retrieval: GESPAR

Some application results References for nonlinear compressed sensing: A. Beck and Y. C. Eldar, "Sparsity Constrained Nonlinear Optimization: Optimality Conditions and Algorithms" Y. Shechtman, A. Beck and Y. C. Eldar "GESPAR: Efficient Phase Retrieval of Sparse Signals“ Y. C. Eldar and S. Mendelson "Phase Retrieval: Stability and Recovery Guarantees"

Page 11: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

In subwavelength imaging the measurement matrix corresponds to the

low pass Fourier coefficients

Does not satisfy conditions of compressed sensing (RIP or coherence)

BP can be shown to recover spikes only if separation is 2/f (Candes et. al.‘ 12)

Nonlocal hard thresholding (NLHT): A specialized algorithm targeting

sparse recovery from lowpass coefficients

An iterative recovery that searches for the zeros rather than the signal peaks

S. Gazit, A. Szameit, Y. C. Eldar and M. Segev, Optics Express, (2009)

Page 12: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Close spikes cannot be recovered by basis pursuit

Erroneous spikes tend to occur but typically in the vicinity of the true spikes

with width proportional to 1/f

Stretches of zero values tend to be correct

Page 13: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Iteration #1 (BPDN): 2μ 2μ 2μ 2μ

Iteration #2 (BPDN with given support): Off-support

Iteration #N (BPDN with given support): Off-support

Window width decreases and height increases with the iterations…

Page 14: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

microscope image reconstructed image SEM image

Abbe limit

100 nm

Can be extended to incoherent light and partially incoherent light Y. Shechtman et al. (2010, 2011)

A. Szameit et al., Nature Materials 2012

Page 15: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

CDI: Recovering near field from freely diffracting intensity pattern

(i.e. from intensity of the Fourier transform)

Phase information is lost

Can we combine bandwidth extrapolation and phase retrieval?

Sub-wavelength image recovery from highly truncated Fourier spectrum

Mathematical formulation:

𝑦 are the measurements

F represents the low pass Fourier coefficients

Highly ill-posed problem!

Page 16: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

There has been an explosion of work on recovery of sparse vectors from linear measurements

Basis of compressed sensing

Many applications in which the measurements are nonlinear 𝑦 = 𝑔 𝑥 Can we extend compressed sensing results to the nonlinear case? Minimize 𝑦 − 𝑔 𝑥 2 subject to a sparsity constraint on x

Page 17: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

We consider the problem min 𝑓 𝑥 𝑠. 𝑡. 𝑥 0 ≤ 𝑘

𝑓 𝑥 is an arbitrary continuously differentiable function

Not necessarily convex!

Special case: Phase retrieval

𝑓 𝑥 = 𝐹𝑖𝑥2 − 𝑦𝑖

2𝑛

𝑖=1

𝐹𝑖 - ith row of Fourier matrix

17 Beck and Eldar, (2013)

Page 18: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

No uniqueness in 1D problems (Hofstetter 64)

Uniqueness in 2D if oversampled by factor 2 (Hayes 82)

No guarantee on stability

No known algorithms to achieve unique solution

Need for regularization:

Support knowledge

Input magnitude

Positivity

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Not sufficient to guarantee uniqueness, stability and algorithms

Page 19: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Since analyzing Fourier measurements is hard we can look at random measurements

𝑦𝑖 = 𝑎𝑖 , 𝑥2 +𝑤𝑖 𝑥 ∈ 𝑅

𝑁 𝑀 = 4𝑁 − 2 measurements needed for uniqueness (Balaw, Casazza, Edidin o6, Bandira et.al 13) 𝑀 = 𝑁log(𝑁) measurements needed for stability (Eldar and Mendelson 12)

Solving 𝑦𝑖 − 𝑎𝑖 , 𝑥2 𝑝𝑀

𝑖=1 1 < 𝑝 ≤ 2 provides stable solution (Eldar and Mendelson 12)

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noise

random vector

Page 20: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Fourier kg t i

k kG G e

Initial guess

Impose Fourier Constraints

'

i

kG F e

Inverse Fourier 'kg t

Impose temporal Constraints:

Support, positivity ,…

1kg t

Basic Scheme (Variants exist):

R. W. Gerchberg (1974), J. Fienup, (1982) S. Mukherjee, ICASSP, (2012)

Measurements

Page 21: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

𝑎𝑘 , 𝑥2 = Tr 𝐴𝑘𝑋 with 𝐴𝑘 = 𝑎𝑘𝑎𝑘

𝑇, 𝑋 = 𝑥𝑥𝑇

Phase retrieval can be written as

minimize rank 𝑋

subject to 𝐴 𝑋 = 𝑏 𝑋 ≥ 0 SDP relaxation: replace rank 𝑋 by Tr 𝑋 or by logdet(𝑋 + 𝜀𝐼) and

apply reweighting Generally improves performance over Fienup Computationally demanding No optimality conditions for general measurements

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Shechtman, Eldar, Szameit, Segev, (2011) Candes, Eldar, Strohmer , Voroninski, (2012)

Advantages/Disadvantages:

Page 22: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

PR methods often perform poorly, no general optimality conditions

Sparsity can be added to improve performance (Moravec et. al 07,

Shechtman et. al 11, Bahman et. al 11, Ohlsson et. al 12, Janganathan 12)

Both Fienup methods and SDP-based techniques can be modified to account for sparsity (Shechtman et. al 11, Mukherjee et. al 12)

SDP methods require 𝑘2log (𝑁) measurements (Candes et. al 12, Li 12)

𝑘log(𝑁/𝑘) measurements needed for stability (Eldar and Mendelson 12)

Solving 𝑦𝑖 − 𝑎𝑖 , 𝑥2 𝑝𝑀

𝑖=1 1 < 𝑝 ≤ 2 subject to a sparsity constraint provides stable solution (Eldar and Mendelson 12)

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Can we efficiently solve the least-squares nonlinear sparse recovery problem?

Page 23: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

General theory and algorithms for nonlinear sparse recovery

Derive conditions for optimal solution

Use them to generate algorithms

Since our problem in non-convex no simple necessary and sufficient conditions

We develop three necessary conditions

Basic feasibility

L-stationarity

CW-minima

Iterative Hard Thresholding Greedy Sparse Simplex (OMP)

23 Beck and Eldar, (2013)

Page 24: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

For unconstrained differentiable problems a necessary condition is that 𝛻𝑓 𝑥∗ = 0

We expect a similar condition over the support S

Condition is quite weak – there can be many BF

points

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Theorem: Any optimal solution is a basic feasible vector: 1. when 𝑥∗ 0 < 𝑘 , 𝛻𝑓 𝑥

∗ = 0 2. when 𝑥∗ 0 = 𝑘 , 𝛻𝑓 𝑥

∗ = 0 for all 𝑖 ∈ 𝑆

Page 25: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

For constrained problems min 𝑓 𝑥 : 𝑥 ∈ 𝐶 where C is convex, a necessary condition is stationarity

< 𝛻𝑓 𝑥∗ , 𝑥 − 𝑥∗ > ≥ 0 𝑓𝑜𝑟 𝑎𝑙𝑙 𝑥 ∈ 𝐶

For any 𝐿 > 0 a vector 𝑥∗ is stationary if and only if

𝑥∗ = 𝑃𝑐(𝑥∗ − 1

𝐿𝛻𝑓 𝑥∗ )

Does not depend on L!

For our nonconvex setting we define an L-stationary point: 𝑥∗ ∈ 𝑃𝑐(𝑥

∗ − 1

𝐿𝛻𝑓 𝑥∗ )

The projection is no longer unique

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Theorem: Let 𝛻𝑓 𝑥 be Lipschitz continuous. Then L-stationarity with L>L(f) is necessary for optimality

Page 26: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Advantages:

L – stationarity is necessary for optimality

Implies basic feasibility

Simple algorithm that finds L – stationary points

Algorithm popular for compressed sensing when 𝑦 = 𝐴𝑥 (Blumensath and Davies, 08)

Disadvantages:

Requires knowledge of Lipschitz constant

Often converges to wrong solution – not a strong condition

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Iterative Hard Thresholding:

𝑥𝑘+1 ∈ 𝐻(𝑥𝑘 − 1

𝐿𝛻𝑓 𝑥𝑘 )

where 𝐻(𝑥)=hard thresholding of 𝑥

Page 27: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

For an unconstrained problem 𝑥∗ is a coordinate-wise minima (CW) if 𝑥𝑖∗ is a minimum with respect to the ith component

𝑥𝑖∗ ∈ 𝑎𝑟𝑔𝑚𝑖𝑛 𝑓(𝑥1

∗, . . , 𝑥𝑖−1∗ , 𝑥𝑖, 𝑥𝑖+1

∗ , … 𝑥𝑛∗)

For our constrained problem we define CW as:

1. 𝑥∗ 0 < 𝑘 𝑎𝑛𝑑 𝑓 𝑥∗ = min

𝑡∈𝑅𝑓(𝑥∗ + 𝑡𝑒𝑖)

2. 𝑥∗ 0 = 𝑘 𝑎𝑛𝑑 𝑓𝑜𝑟 𝑒𝑣𝑒𝑟𝑦 𝑖 ∈ 𝑆 𝑓 𝑥∗ ≤ min

𝑡∈𝑅𝑓(𝑥∗ − 𝑥𝑖

∗𝑒𝑖 + 𝑡𝑒𝑗)

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Theorem: Any optimal solution is a CW minima

Page 28: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Does not require Lipschitz continuity Any optimal solution is a CW minima Implies basic feasibility If gradient is Lipschitz continuous:

In fact, CW minima implies L’ stationarity with 𝐿’ < 𝐿

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Optimal solution CW-minima L’-stationarity L-stationarity

Optimal solution CW-minima L-stationarity BF

Page 29: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Generalization of matching pursuit to nonlinear objectives

Additional correction step which improves OMP

Converges to CW minima (stronger than IHT guarantee)

Does not require Lipschitz continuity

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General step 𝑥∗ 0 ≤ 𝑘 : find coordinate that minimizes 𝑓(𝑥)

𝑡𝑖 ∈ 𝑎𝑟𝑔min𝑡𝑓(𝑥𝑘 + 𝑡𝑒𝑖) 𝑓𝑖 = min

𝑡𝑓(𝑥𝑘 + 𝑡𝑒𝑖)

𝑥𝑘+1 = 𝑥𝑘 + 𝑡𝑖∗𝑒𝑖∗

Swap 𝑥∗ 0 = 𝑘 : Swap index i with best j if lower objective

Page 30: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Converges to CW-minima: strongest necessary condition

Applicable to general functions

No need to know Lipschitz constant

Generalizes OMP to nonlinear setting

Improves on OMP in linear case

Arbitrary initial points

Correction stage

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Page 31: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Generate a matrix 𝐴 of size 4x5

𝑦 = 𝐴𝑥 where 𝑥 = [−1 − 1 0 0 0 ]𝑇

In this problem there are 10 BF points

We implement IHT and the greedy method with 1000 randomly generated

values 𝑥0

Number of times method converged to each BF

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BF vector 1 2 3 4 5 6 7 8 9 10

IHT 329 50 63 92 229 0 130 0 61 46

Greedy 813 0 0 112 0 0 75 0 0 0

L - stationarity

CW minima

Page 32: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Iterations of greedy method with 𝑥0 = [0 1 5 0 0 0]𝑇

32 𝑥 = [−1 − 1 0 0 0 ]𝑇

Page 33: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Specializing our general algorithm to phase retrieval

Local search method with update of support

For given support solution found via Damped Gauss Newton

Efficient and more accurate than current techniques

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1. For a given support: minimizing objective over support by linearizing the function around current support and solve for 𝑦𝑘

𝑧𝑘 = 𝑧𝑘−1 + 𝑡𝑘(𝑦𝑘 − 𝑧𝑘−1)

2. Find support by finding best swap: swap index with small value

𝑥𝑖 with index with large value 𝛻𝑓(𝑥𝑗)

determined by backtracking

Shechtman, Beck and Eldar, (2013)

Page 34: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Each point = 100 signals

n=64 m=128

Page 35: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Diffraction-limited (low frequency)

intensity measurements

Model Fourier transform

Model FT intensity

Frequency [1/]

Fre

qu

en

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1/

]

-5 0 5

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-4

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0

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Circles are 100 nm diameter

Wavelength 532 nm

SEM image Sparse recovery

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Blurred image

Szameit et al., Nature Materials, (2012)

Page 36: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Concept : A short x-ray pulse is scattered from a 3D

molecule combined of known elements. The 3D scattered diffraction pattern is then sampled in a single shot

Recover a 3D molecule using 2D sample

K.S. Raines et al. Nature 463, 214 ,(2010). Mutzafi et. al., (2013).

Page 37: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

0in kz

k

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*outE a h k

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Page 39: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

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Far Field Diffraction Measurement: Fourier Magnitude

Coherent illumination

Assumption: Sparse difference between consecutive frames Can be used to decrease acquisition time improve temporal

resolution

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Page 40: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

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Page 41: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Sparse CDI (quadratic CS):

2, is sparsei iy F x x

Sparse difference CDI (quadratic CS):

2

, is sparse

is known

i iy F x x x

x

“Clean” first frame 41

Page 42: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

1225 unknowns, 676 samples, practically noiseless 42

Page 43: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

1225 unknowns, 676 samples, practically noiseless 43

Page 44: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

Prior knowledge of sparsity compensates for loss of optical

information

Subwavelength imaging and CDI

Necessary optimality conditions for nonlinear sparse recovery

Efficient greedy algorithm that extends OMP to general nonlinear

sparse recovery

GESPAR: Efficient phase retrieval method

Applications to optics

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Exploring connections between sparse recovery and optical imaging can be fruitful in both directions

Page 45: Yonina Eldar Collaboration with the groups of Prof. Moti ... obtain the Fourier transform of the image ... Greedy sparse simplex ... A short x-ray pulse is scattered from a 3D

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If you found this interesting … Looking for a post-doc in

information processing!

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