10% Acrylamide Gels for SDS-PAGEmcb.berkeley.edu/labs/krantz/protocols/SDS_PAGE_gels.pdf · 10%...

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10% Acrylamide Gels for SDS-PAGE Resolving gel master mix: 400 ml H2O 250 ml 1.5 M Tris pH 8.8 10 ml 10% SDS Stacking gel master mix: 340 ml H2O 62.5 ml 1.0 M Tris pH 6.8 5 ml 10% SDS Pouring resolving gel: 1. Make 6 ml of resolving gel (makes 1 gel, with a little bit leftover) 3.96 ml of resolving gel master mix 1.98 ml of 30% acrylamide 60 μl of 10% APS 2.4 μl of TEMED 2. Immediately load gel mixture into the casing with a pipette – fill to the line on the casing. Add EtOH on top of gel. Save any leftover mixture to help you determine when the gel is set. It should take about 30 minutes to polymerize at room temperature. To speed up polymerization, you can add more APS and TEMED to the mixture. You can also degas the solution under a vacuum for about 10 minutes before adding the APS and TEMED. 3. Once resolving gel is set, pour off EtOH. Rinse with DI water. The gel can be stored for later use (store at 4 °C in 1x Tris Glycine buffer) or can be used immediately. Pouring stacking gel: 1. Using a paper towel, dry the inside of the casing as well as possible. Try not to disturb the top of the resolving gel. 2. Make 3 ml of stacking gel (makes stacker for 1 gel). 2.51 ml of stacking gel master mix 0.5 ml of 30% acrylamide 30 μl of 10% APS 3 μl of TEMED

Transcript of 10% Acrylamide Gels for SDS-PAGEmcb.berkeley.edu/labs/krantz/protocols/SDS_PAGE_gels.pdf · 10%...

Page 1: 10% Acrylamide Gels for SDS-PAGEmcb.berkeley.edu/labs/krantz/protocols/SDS_PAGE_gels.pdf · 10% Acrylamide Gels for SDS-PAGE Resolving gel master mix: 400 ml H2O 250 ml 1.5 M Tris

10% Acrylamide Gels for SDS-PAGE

Resolving gel master mix:400 ml H2O250 ml 1.5 M Tris pH 8.810 ml 10% SDS

Stacking gel master mix:340 ml H2O62.5 ml 1.0 M Tris pH 6.85 ml 10% SDS

Pouring resolving gel:1. Make 6 ml of resolving gel (makes 1 gel, with a little bit leftover)

3.96 ml of resolving gel master mix1.98 ml of 30% acrylamide60 μl of 10% APS2.4 μl of TEMED

2. Immediately load gel mixture into the casing with a pipette – fill to the line on thecasing. Add EtOH on top of gel. Save any leftover mixture to help you determinewhen the gel is set. It should take about 30 minutes to polymerize at roomtemperature. To speed up polymerization, you can add more APS and TEMEDto the mixture. You can also degas the solution under a vacuum for about 10minutes before adding the APS and TEMED.

3. Once resolving gel is set, pour off EtOH. Rinse with DI water. The gel can bestored for later use (store at 4 °C in 1x Tris Glycine buffer) or can be usedimmediately.

Pouring stacking gel:1. Using a paper towel, dry the inside of the casing as well as possible. Try not to

disturb the top of the resolving gel.

2. Make 3 ml of stacking gel (makes stacker for 1 gel).2.51 ml of stacking gel master mix0.5 ml of 30% acrylamide30 μl of 10% APS3 μl of TEMED

Page 2: 10% Acrylamide Gels for SDS-PAGEmcb.berkeley.edu/labs/krantz/protocols/SDS_PAGE_gels.pdf · 10% Acrylamide Gels for SDS-PAGE Resolving gel master mix: 400 ml H2O 250 ml 1.5 M Tris

3. Make sure you have gel comb ready.

4. Load stacking solution onto the top of the resolving gel. It takes about 2 mls ofsolution to fill the gel casing. Make sure there are no air bubbles. Insert gel combcarefully (sometimes the solution will squirt out!). Save any leftover mixture tohelp you determine when the gel is set. It should take about 10-15 minutes topolymerize at room temperature. To speed up polymerization, you can degas thesolution under vacuum for about 10 minutes before adding the APS and TEMED.