wild type E - Imperial College London Main... · cim asryqknarnkacclllilaivlviivlavtl bci...
Transcript of wild type E - Imperial College London Main... · cim asryqknarnkacclllilaivlviivlavtl bci...
Ani ASRYQKNARTKACCLLIILAVILAIIILAAVL Ang ASRYQKNARNKACCLLVILAVILTIIVLAATL Fox AARYQKAARNKSCCLLLILAVILTIVILAIVL Ncr AARYQKNARGKACCLLLILSVILTIVLLAVFL Mor AARYQKNARSKACCLLLILSVILTIVLLAIFL Pbr ASRYQKKARNKACCLLLILAVVLVIIVLAATL Cim ASRYQKNARNKACCLLLILAIVLVIIVLAVTL
Bci AHEYQRRAGRRAACLLLILSVVVAVVLLAIL- Sce AMRYQKRTSRWRVYLLIVLLVMLLFIFLIM-- Cal ANEYQKQKGKWSCILLVALCIFLLVIVLIVV- Spo ANEHSRKARKRSFCFLVILVVILGVILTALIM
wild type I257D C253,254S I257DC253,254S
10 mm
nucnuc
Ile257Asp
wild type
Cys253,254Ser Ile257Asp
Cys253,254Ser
10 mm
A
C
D
Cys253Cys254
Ile257
24 s
ec
10 mm
wild type
E
Cys253,254Ser
Ile257Asp
Cys253,254Ser Ile257Asp
TMD
*
wild
typ
e
I257D
C253,2
54S
I257D
C253,2
54S
GFPPepAs
PepA
WB a-PepA
wild
typ
e
I257D
C253,2
54S
I257D
C253,2
54S
WB a-GFP
actin
B
10 mm
18 s
ec
GFP-TlgBj
k
( ((
'
'
'
'
'
'
TlgB
RabA
56 s
ec
10 mm
5 mm
A
B
MCA MMA
30ºC
37ºC
42ºC
wt tlgBΔtlgAΔtlgB ΔtlgAΔ wt tlgBΔ
tlgAΔtlgB ΔtlgAΔ
WT tlgAD tlgBD tlgAD�tlgBD
0
5
10
15
20
25
30
WT tlgAD tlgBDtlgAD�tlgBD
inte
gra
ted in
tensi
ty 1
0e-6
arb
itrary
units
A
B
C***
***n.s.
B
A
HA3-Vti1
Qb
I IP FT IP FT
α-Stx α-Pre
HA3-Tlg1
HA3-Syn8
HA3-Vam7
Qc
HA3-SynA
Ykt6-HA3
Nyv1-HA3
R
I IP FT IP FT I IP FT IP FT
α-Stx α-Pre α-Stx α-Pre
SedV TlgB PepA
SedV TlgB PepA
SedV TlgB PepA
I IP FT IP FT
α-Stx α-PreI IP FT IP FT I IP FT IP FT
α-Stx α-Pre α-Stx α-Pre
I IP FT IP FT
α-Stx α-PreI IP FT IP FT I IP FT IP FT
α-Stx α-Pre α-Stx α-Pre
I IP FT
α-SedV α-TlgB α-PepA
GFP-SedV
GFP-TlgB
IP FT IP FT
GFP-PepA
blot -GFPα
Vti1
Tlg
1
Syn
8
SedV
TlgB
PepA
Vam
7
Syn
A
Ykt
6
Nyv1C
wt tlgBΔvps45Δ pepAΔ
pepAΔ pepAΔsltAΔ
vps45Δ vps45ΔsltAΔ
A
B
In PD FT PD FT
a-TlgB pre a-PepAIn PD FT PD FT
pre
1 2 3 4 5 6 7 8 9 10
Vps33
In PD FT PD FT
a-TlgB pre a-PepAIn PD FT PD FT
pre
Vps45
IPs of Vps45-HA3 extracts
IPs of Vps33-HA3 extractsIn
put T
NT
IP,
pre
IP-T
lgB
, a
Input T
NT
IP,
pre
IP-P
ep
A, a
TNT Vps33-HA3 TNT Vps33-HA3
TNT Vps45-HA3 TNT Vps45-HA3
Vps45
Vps33
SM1
AB
Direct or indirect interaction test
extracts
1 2 3 4 5 6 7 8 9 10
AB
SM1
HA3 Stx1
Direct interaction test
IP IP
A B
IPs of Vps45-HA3 extracts IPs of TNT-synthesized proteins
SM1
SM2
SM1HA3
Stx2Stx1
SM1
SM1
AB
Stx1
Stx1
or
Stx1
Stx1
I IP FT IP FT
α-Pep12 α-Pre
Vps41-HA
Vps8-HA
16
1118
338
3
16
1118
3341
39
LE/MVB
EE
vac
Rab5Rab7
CORVET HOPS
TlgB
Vti1
Vam7
Syn8
TlgATlgA SynA
Nyv1
Ykt6
SedV
PepA
Qa Qb Qc R
TG
N/P
GE
Go
lgi
LE
<<
EE
VA
C
A
SedV
Vti1 (Qb)Syn8/Tlg1(Qc)SynA/Ykt6 (R)
Nyv1 ?
exocytosis
earlyGolgi
EE
V
PGE
Nyv1 ?
earlyGolgi
V
TGN
Nyv1 ?
Vti1 (Qb)Vam7 (Qc)Nyv1 (R)
earlyGolgi
LE
Vti1 (Qb)TlgA (Qc)SynA (R)
Nyv1 ?
endocytosis
earlyGolgi
Vac
TlgB
TGN
TlgB
Pep12PepA
Pep12PepA
Pep12PepA
B
Vti1 (Qb)Syn8/Tlg1(Qc)SynA/Ykt6 (R)
?