Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1...

22
Supplementary Figure.1 NF-κB p65 /β-actin protein ** ID8 HM-1 1 2 3 ** ** * * * β-actin ID8 HM-1 +CPA(0.7uM) non-treat +CPA(7uM) +CPA(70uM) NF-κB p65 β-actin NF-κB p65 A B 0 +GEM(24uM) +PTX(2uM) non-treat +CBDCA(20uM) +GEM(120uM) +GEM(600uM) +PTX(10uM) +PTX(20uM) +CBDCA(500uM) +CBDCA(100uM) +CPA(0.7uM) +CPA(7uM) +CPA(70uM) 0 +GEM(24uM) +PTX(2uM) non-treat +CBDCA(20uM) +GEM(120uM) +GEM(600uM) +PTX(10uM) +PTX(20uM) +CBDCA(500uM) +CBDCA(100uM) +CPA(0.7uM) +CPA(7uM) +CPA(70uM) * ** ** ** ** * * * * **

Transcript of Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1...

Page 1: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure.1

NF-

κB

p6

5 /

β-a

ctin

pro

tein

**

ID8 HM-1

1

2

3

****

** *

β-actin

ID8

HM-1+

CPA

(0.7

uM

)

non-t

reat

+C

PA(7

uM

)

+C

PA(7

0uM

)

NF-κB p65

β-actinNF-κB p65

A B

0

+G

EM

(24

uM

)

+PTX

(2uM

)

non-t

reat

+C

BD

CA

(20

uM

)

+G

EM

(12

0uM

)+

GEM

(60

0uM

)

+PTX

(10

uM

)+

PTX

(20

uM

)

+C

BD

CA

(50

0uM

)+

CB

DC

A(1

00

uM

)

+C

PA(0

.7uM

)+

CPA

(7uM

)+

CPA

(70

uM

)

0

+G

EM

(24

uM

)

+PTX

(2uM

)

non-t

reat

+C

BD

CA

(20

uM

)

+G

EM

(12

0uM

)+

GEM

(60

0uM

)

+PTX

(10

uM

)+

PTX

(20

uM

)

+C

BD

CA

(50

0uM

)+

CB

DC

A(1

00

uM

)

+C

PA(0

.7uM

)+

CPA

(7uM

)+

CPA

(70

uM

)

*

**** **

*** **

*

**

Page 2: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure.2

PD-L1

β-actin

NF-κB p65

ID8

PD-L1

NF-κB p65

β-actin

HM-1

+G

EM

(24

uM

)

+PTX

(2u

M)

non

-tre

at

+C

BD

CA

(20

uM

)

+G

EM

(12

0u

M)

+G

EM

(60

0u

M)

+PTX

(10

uM

)

+PTX

(20

uM

)

+C

BD

CA

(10

0u

M)

+C

BD

CA

(50

0u

M)

+G

EM

(24

uM

)

+PTX

(2u

M)

non

-tre

at

+C

BD

CA

(20

uM

)

+G

EM

(12

0u

M)

+G

EM

(60

0u

M)

+PTX

(10

uM

)

+PTX

(20

uM

)

+C

BD

CA

(10

0u

M)

+C

BD

CA

(50

0u

M)

Page 3: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure.3

NF-κB p65

β-actin

+G

EM

+PTX

+G

EM

+PTX

ovary1847 SK-OV-3

non-t

reat

non-t

reat

NF-κB p65

β-actin

+G

EM

+PTX

+G

EM

+PTX

RMGII OVCAR8

non-t

reat

non-t

reat

PD-L1

ovary1847

MHC class I

β-actin

+G

EM

(24

uM

)

+PTX

(2uM

)

non-t

reat

+G

EM

(12

0uM

)

+G

EM

(60

0uM

)

+PTX

(10

uM

)

+PTX

(20

uM

)

β-actin

+G

EM

(24

uM

)

+PTX

(2uM

)

non-t

reat

+G

EM

(12

0uM

)

+G

EM

(60

0uM

)

+PTX

(10

uM

)

+PTX

(20

uM

)

PD-L1

SK-OV-3

MHC class I

Page 4: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

PTX

GEM

CB

DC

A

non-t

reat

ID8 HM-1

PTX

GEM

CB

DC

A

non-t

reat0

20

40

60

*****

*

****

MH

C c

lass

I p

rote

in

Supplementary Figure.4

C

--

-+

+-

--

-+

+-

OVCAR8RMGIIGEMPTX

MHC class I

β-actin

MH

C c

lass

I /

β-a

ctin

pro

tein

RMGII OVCAR8

non-t

reat

PTX

GEM

PTX

GEM

non-t

reat0.0

0.5

2.0

2.5 ******

**

1.0

1.5

A B

MH

C c

lass

I /

β-a

ctin

pro

tein

SK-OV-3ovary1847

0

1

2

3

* *

**

**

+G

EM

(24

uM

)

+PTX

(2uM

)

non-t

reat

+G

EM

(12

0uM

)+

GEM

(60

0uM

)

+PTX

(10

uM

)+

PTX

(20

uM

)

+G

EM

(24

uM

)

+PTX

(2uM

)

non-t

reat

+G

EM

(12

0uM

)+

GEM

(60

0uM

)

+PTX

(10

uM

)+

PTX

(20

uM

)

* *

**

**

Page 5: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure. 5

P=0.002

DTX and CAPE

PD

-L1

/GA

PD

H m

RN

A

before after

6.5

6.0

5.5

5.0

Page 6: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

PTX

GEM

CB

DC

A

non-t

reat

PD

-L1

pro

tein

ID8 HM-1

PTX

GEM

CB

DC

A

non-t

reat0

5

10

15

**

****

**

****

PD

-L1

-act

in p

rote

in ID8 HM-1

1

2

3

0

Supplementary Figure.6

A B

** **

*** *

PD-L1β-actinPD-L1β-actin

ID8

HM-1+

IFN

-γ(5

00

pg/m

l)

non-t

reat

+IF

N-

γ(1

ng/m

l)+

IFN

-γ(4

ng/m

l)

PD-L1

β-actin

ID8

HM-1

+C

PA(0

.7uM

)

non-t

reat

+C

PA(7

uM

)

+C

PA(7

0uM

)

PD-L1

β-actin

C D

+G

EM

(24

uM

)

+PTX

(2uM

)

non-t

reat

+C

BD

CA

(20

uM

)

+G

EM

(12

0uM

)+

GEM

(60

0uM

)

+PTX

(10

uM

)+

PTX

(20

uM

)

+C

BD

CA

(50

0uM

)+

CB

DC

A(1

00

uM

)

+C

PA(0

.7uM

)+

CPA

(7uM

)+

CPA

(70

uM

)

+G

EM

(24

uM

)

+PTX

(2uM

)

non-t

reat

+C

BD

CA

(20

uM

)

+G

EM

(12

0uM

)+

GEM

(60

0uM

)

+PTX

(10

uM

)+

PTX

(20

uM

)

+C

BD

CA

(50

0uM

)+

CB

DC

A(1

00

uM

)

+C

PA(0

.7uM

)+

CPA

(7uM

)+

CPA

(70

uM

)

* ** ** ** ***

**

**

** **

Page 7: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

--

-+

+-

--

-+

+-

OVCAR8RMGII

GEMPTX

β-actin

PD-L1

RMGII OVCAR8

PD

-L1

-act

in p

rote

in

2.01.51.00.50.0

2.5PTX

GEM

non-t

reat

PTX

GEM

non-t

reat

**

** ****

PD-L1

OVCAR813.28 32.21 27.2

14.41 49.29 71.26RMGII

100101102103104 100101102103104100101102103104

PD

-L1

pro

tein

SK-OV-3ovary1847 RMGII OVCAR8

PTX

GEM

non-t

reat

PTX

GEM

non-t

reat

PTX

GEM

non-t

reat

PTX

GEM

non-t

reat

80

60

40

20

0

100

**

**

**

****

******

Supplementary Figure.7

A B

C

PD

-L1

-act

in p

rote

in

2

1

0

3

D

+G

EM

(24

uM

)

+PTX

(2uM

)

non-t

reat

+G

EM

(12

0uM

)+

GEM

(60

0uM

)

+PTX

(10

uM

)+

PTX

(20

uM

)

+G

EM

(24

uM

)

+PTX

(2uM

)

non-t

reat

+G

EM

(12

0uM

)+

GEM

(60

0uM

)

+PTX

(10

uM

)+

PTX

(20

uM

)

SK-OV-3ovary1847

* *

**

*** *

**

**

Page 8: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure. 8

NF-κB p65

β-actin

ID8

shR

ela

69

ID8

shcC

ontr

ol

ID8

shR

ela

70

HM

-1sh

Rela

69

HM

-1sh

Contr

ol

HM

-1sh

Rela

70

B

Rela

/GA

PD

H m

RN

A

shC

ontr

ol

shR

ela

69

shR

ela

70

ID8 HM-1

shC

ontr

ol

shR

ela

69

shR

ela

70

A

3

2

1

0

4

C

NF-

κB

p6

5 /

β-a

ctin

pro

tein

shC

ontr

ol

shR

ela

69

shR

ela

70

ID8 HM-1

shC

ontr

ol

shR

ela

69

shR

ela

70

1.5

1.0

0.5

0.0

2.0

2.5

**

**

** *

*

Page 9: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

MH

C c

lass

I p

rote

in

ID8shRela69

ID8shControl

non-t

reat

PTX

GEM

non-t

reat

PTX

GEM

40

20

0

80

60*

**

Supplementary Figure.9

Page 10: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

SK-OV-3ovary1847 OVCAR8

NF-

κB

p6

5 /

β-a

ctin

pro

tein

siC

ontr

ol

siN

F-κ

B p

65

siC

ontr

ol

siN

F-κ

B p

65

siC

ontr

ol

siN

F-κ

B p

65

PTX non-treat

GEM

2.0

1.5

1.0

0.5

0.0

2.5

A

****

****

****

MHC class I

GEMPTX

--

-+

+-

--

-+

+-

OVCAR8siControl

OVCAR8siNF-κB p65

β-actin

NF-κB p65

PD-L1

Supplementary Figure.10

COVCAR8

2.0

1.5

1.0

0.5

0.0

2.5**

**

siControl siNF-κB p65

GEM PTX

non-treat

MH

C c

lass

I /

β-a

ctin

pro

tein

GEM PTX

non-treat

PD

-L1

-act

in p

rote

in OVCAR8

2.0

1.5

1.0

0.5

0.0

2.5 ****

siControl siNF-κB p65

D

B

Page 11: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

PD-L1

NF-κB p65

β-actin

+G

EM

+PTX

+G

EM

+PTX

siC

ontr

ol

siN

F-κ

B p

65

MHC class I

ovary1847

Supplementary Figure.11

+G

EM

+PTX

+G

EM

+PTX

siC

ontr

ol

PD-L1

NF-κB p65

β-actin

MHC class I

SK-OV-3

siN

F-κ

B p

65

+G

EM

+PTX

+G

EM

+PTX

siC

ontr

ol

siN

F-κ

B p

65

PD-L1

NF-κB p65

β-actin

MHC class I

OVCAR8

Page 12: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure.12

A

NF-

κB

p6

5 /

β-a

ctin

pro

tein

siC

ontr

ol

siN

F-k

B p

65

GEM PTX

non-treat

siC

ontr

ol

siN

F-k

B p

65

ID8 HM-1

1.5

1.0

0.5

0.0

2.0

2.5

**

****

**

NF-κB p65

GEMPTX

--

-+

+-

--

-+

+-

HM-1siNF-κB p65

HM-1siControl

β-actin

PD-L1

B

1.0

0.5

0.0

2.0

1.5

siControlsiNF-κB p65

GEM PTX

non-treat

**

**

PD

-L1

-act

in p

rote

in

GEM

non-t

reat

PTX

GEM

non-t

reat

PTX

GEM

non-t

reat

PTXP

D-L

1 /

β-a

ctin

pro

tein

shRela69shRela70shControl

2.01.51.00.50.0

2.5**

**

GEMPTX

--

-+

+-

--

-+

+-

HM-1shRela69

HM-1shRela70

β-actin

PD-L1

--

-+

+-

HM-1shControl

C

Page 13: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

PD-L1

NF-κB p65

β-actin

+G

EM

+PTX

+G

EM

+PTX

ID8siControl

ID8siNF-κB p65

NF-κB p65

β-actin

+G

EM

+PTX

+G

EM

+PTX

HM-1siControl

HM-1siNF-κB p65

PD-L1

Supplementary Figure.13

non-t

reat

non-t

reat

non-t

reat

non-t

reat

Page 14: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

PD-L1

β-actin

+G

EM

+PTX

+G

EM

+PTX

ID8shRela69

ID8ShRela70

+G

EM

+PTX

ID8ShControl

+G

EM

+PTX

+G

EM

+PTX

+G

EM

+PTX

PD-L1

β-actin

Supplementary Figure.14

non-t

reat

non-t

reat

non-t

reat

non-t

reat

non-t

reat

non-t

reat

HM-1shRela69

HM-1ShRela70

HM-1ShControl

Page 15: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure. 15

ID8 shControl ID8 shIfngr1

IFNGR1

62 9.25

100101102103104100101102103104

Page 16: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

PD-L1

NF-κB p65

β-actin

Supplementary Figure. 16

IFN-γGEMPTX

ID8shIfngr1ID8shControl

---

--+

-+-

+--

---

--+

-+-

+--

Page 17: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure.17

control GEM

NF-κB p65

PD-L1

CD4+ TILs

CD8+ TILsN

F-κB

p6

5

stain

ing

sco

re

control

GEM

20151050

PD

-L1

st

ain

ing

sco

re

control GEM

15

10

5

0

CD

8+ T

cell

nu

mb

ers

/20

0╳

control GEM

15

10

5

0

CD

4+ T

cell

nu

mb

ers

/20

0╳

control GEM

403020100

**

**

*

*

B

%C

D1

07

a+ce

ll

PTX -pretreatedID8-controlID8-pdl1KO

OVA loading

15

10

5

0

***

*

----

+-++

++-+

-+--

A

Page 18: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure. 18

B

AID8pdl1

PD

-L1

/GA

PD

H m

RN

A

PTX GEM

ID8Mirpdl1

non-treat

0.015

0.010

0.005

0.000

0.020

GEMPTX

--

-+

+-

--

-+

+-

ID8MirControl

ID8pdl1

β-actin

NF-κB p65

PD-L1

--

-+

+-

ID8Mirpdl1

PD

-L1

/GA

PD

H m

RN

A

non-treat

PTX GEM

ID8MirControl

0.06

0.04

0.02

0.00

0.08

****

PD

-L1

/GA

PD

H m

RN

A

non-treat PTX GEM

6

4

2

0

****

Page 19: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary figure.19

IgGIgG + GEMαPD-1 αPD-1 +GEM

%su

rviv

al

days

B

60

40

20

0

80

100

0 50 100

A

ID8-pdl1KOID8-pdl1KO + GEM

ID8-control + GEMID8-control

%su

rviv

al

days

ID8-pdl1ID8-pdl1 + GEM

60

40

20

0

80

100

0 50 100

Page 20: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure.20

C

GEM

PTX

ID8

OVA

PD-L1

β-actin

NF-κB p65

OVA

β-actin

ID8

OVA

1

ID8

OVA

2

ID8

lacZ

A B

*%ly

sis

E/T ration

ID8OVA ID8lacZ with OVA loading

ID8lacZ 150

100

50

0131030

D

PD

-L1

/GA

PD

H m

RN

A

ID8lacZ ID8OVA

GEM PTX

non-treat 0.06

0.04

0.02

0.00

****

****

Page 21: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure 21

A B

CD

4+ T

ILs/

tum

or(

%)

contr

ol

PTX

αPD

-1

αPD

-1+

PTX

0.060.040.020.00

0.080.10

**

*C

D8+

TIL

s/tu

mor(

%)

contr

ol

PTX

αPD

-1

αPD

-1+

PTX

0.15

0.10

0.05

0.00

0.20

**

*

C

PD

-1+

TIL

s/TIL

s(%

)

contr

ol

PTX

αPD

-1

αPD

-1+

PTX

0.30.20.10.0

0.40.5 **

*

Page 22: Supplementary Figure.1 NF- κ B p65 / β- actin protein ** ID8HM-1 1 2 3 ** * * * β-actin ID8 HM-1 +CPA(0.7uM)non-treat+CPA(7uM)+CPA(70uM) NF-κB p65 β-actin.

Supplementary Figure.22

control PTX

Gr-1

control GEM

Gr-1

Gr-

1+ c

ell

nu

mb

ers

/20

0╳

control PTX

2520151050

Gr-

1+ c

ell

nu

mb

ers

/20

0╳

control GEM

2520151050

*