Role of GABA Shunt Pathway in Plant Abiotic Stress Tolerance
Transcript of Role of GABA Shunt Pathway in Plant Abiotic Stress Tolerance
Role of GABA Shunt Pathway in Plant Abiotic Stress Tolerance
Dr. Nisreen A. AL-QuraanJordan University of Science and Technology
JORDAN
What is GABA?
• GABA : Gamma-aminobutyric Acid • Four carbon non-protein amino
acid• It exists in non-bound form• Highly soluble in water• Has amino group on the γ-carbon
rather than on the α-carbon• GABA is a zwitterion (carry both +
and – charges)• Express in plant tissue under stress
conditions.
COO-
|
CH2
|
CH2
|
CH2-NH+3
γγ--Aminobutyric Aminobutyric acidacid
GABA Role in plants:
• GABA level in plant are low (0.03 to 2.0 µmol/g Fresh weight
• Increases in response to:- Heat shock- Cold stress- Mechanical stimulation - Drought stress- Salinity - Biotic stress
GABA shunt Enzymes in Plants
• Glutamate Decarboxylase (GAD)
• GABA Transaminase (GABA-TK) or
(GABA-TP)
• Succinic Semialdehyde Dehydrogenase (SSADH)
GABA Shunt in Plants
MITOCHONDRIAMITOCHONDRIA CYTOSOLCYTOSOL
PyruvatePyruvate
CoACoA
AcetylAcetyl--CoACoA
CitrateCitrate
OxaloacetateOxaloacetate
IsocitrateIsocitrate
ADP+PADP+P ii
CoACoA22--ketoglutarateketoglutarate 22--ketoglutarateketoglutarate
COCO22
NADNAD++
NADH+HNADH+H++
SuccinylSuccinyl--CoACoA
NADNAD++
NADH+HNADH+H++COCO22
NADNAD++
NADH+HNADH+H++
SuccinateSuccinate
FADHFADH22 FADFAD
FumarateFumarate
MalateMalate
HH22OO
PyruvatePyruvate
Succinyl-semialdehydeSuccinylSuccinyl--semialdehydesemialdehyde
GABAGABAGABAHH++COCO22
GlutamateGlutamateGlutamate
ATPATP
CoACoACOCO22
NADH+HNADH+H++
NADNAD++
IsocitrateIsocitrate
COCO22
NADPNADP++
NADPH + HNADPH + H++
GABAGABAGABA
NADH+HNADH+H++
NADNAD++
AlanineAlanineAlanine AlanineAlanineAlanine
GADGAD
GABAGABA--TPTP (1)(1)(2)(2)
(3)(3)SSADHSSADH
AATAATcytcyt
TCA TCA CycleCycle
Mito
chon
dria
l M
itoch
ondr
ial
inne
r mem
bran
ein
ner m
embr
ane
GHBGHBGHB
Succinyl-semialdehydeSuccinylSuccinyl--semialdehydesemialdehyde
NADPNADP++
NADPHNADPH+ H+ H++
Mito
chon
dria
l M
itoch
ondr
ial
inne
r mem
bran
ein
ner m
embr
ane
GHB DH
GHB DH
Locy et al. 2000Locy et al. 2000
Glutamate Decarboxylase (GAD):
• Cytosolic enzyme optimal PH ~5.5
• Calcium/Calmodulin binding protein
• In Arabidopsis two expressed isoforms:
- GAD I : 58 KD ( exclusively in roots)
- GAD II: 56 KD ( in all organs)
• Both under Calcium/ Calmodulin regulation
• 87% identical amino acid sequences
Ca+2/CaM-GADAbiotic stress:- Ca+2 Elevation-Ca+2/CaM complex-CaM/GAD Bound state- GABA shunt- CaM regulation of other proteins (CaM-binding proteins)
CaM-Ca /GAD
Ca+2/CaM- Acidic protein (4 EF hand , 12 amino
acids Asp and Glut)- 4 Ca+2 binding sites- CaM/Ca+2 Complex - Modulation of various enzyme activities.
Molecular Plant • Volume 2 • Number 1 • Pages 13–21 • January 2009Molecular Plant • Volume 2 • Number 1 • Pages 13–21 • January 2009
Insertion sites in CAM genes
AL-Quraan et al. 2008AL-Quraan et al. 2008
• Normalized expression of nine CAM genes in root and shoot tissues of wild type A. thaliana grown at 25ºC.
0
0.5
1
1.5
2
2.5
CAM1CAM2
CAM3CAM4
CAM5CAM6
CAM7CAM8
CAM9
Nor
mal
ized
exp
ress
ion
Root Shoot
AL-Quraan et al. 2010AL-Quraan et al. 2010
• Normalized expression of CAM gene in root and shoot tissues of the corresponding cam mutants of A. thaliana at 25ºC.
00.5
11.5
22.5
33.5
44.5
55.5
cam1
cam2-1
cam2-2
cam3-2
cam3-3
cam4
cam5-1
cam5-2
cam5-3
cam5-4
cam6-1
cam7-1
Nor
mal
ized
exp
ress
ion
Root Shoot
AL-Quraan et al. 2010AL-Quraan et al. 2010
AL-Quraan et al. 2010AL-Quraan et al. 2010
Seed germination: 42 ºC
0
20
40
60
80
100
120
WT cam5-4 cam6-1
Ger
min
atio
n as
%W
T
No treatment42ºC, 2 hr
* *
AL-Quraan et al. 2010AL-Quraan et al. 2010
Seedling survival: 42ºC
0
20
40
60
80
100
120
WT cam5-4 cam6-1
Surv
ival
as
%W
T
No treatment 42ºC, 30min42ºC, 1 hr42ºC, 2hr
* **
* * *
AL-Quraan et al. 2008AL-Quraan et al. 2008
MDA level: 42 ºCHeat MAD: Root
0.0
0.2
0.4
0.6
0.8
1.0
1.2
1.4
No treatment 42ºC, 2hr 42ºC, 2hr- recovery
MD
A le
vel n
mol
/mgF
W
cam5-4cam6-1WT
Heat MDA: Shoot
0.0
0.2
0.4
0.6
0.8
1.0
1.2
1.4
No treatment 42ºC, 2hr 42ºC, 2hr- recovery
MD
A le
vel n
mol
/mgF
W
cam5-4cam6-1WT
AL-Quraan et al. 2008AL-Quraan et al. 2008
GABA shunt metabolites: 42 ºC (Root)
Heat treatments: Root
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10111213
cam5-4
cam6-1 WT
cam5-4
cam6-1 W
T
cam5-4
cam6-1 W
T
cam5-4
cam6-1 W
T
Met
abol
ites
leve
l nm
ol/m
gFW
fo
ld in
crea
seGABA Alanine Glutamate
No treatment 30 min 1 hr 2 hr
AL-Quraan et al. 2008AL-Quraan et al. 2008
GABA shunt metabolites: 42 ºC (Shoot)
No treatment 30 min 1 hr 2 hr
Heat teatments: Shoot
0
1
2
3
4
5
6
cam5-4
cam6-1 WT
cam5-4
cam6-1 W
T
cam5-4
cam6-1 WT
cam5-4
cam6-1 W
T
Met
abol
ites
leve
l nm
ol/m
gFW
fo
ld in
crea
se
GABA Alanine Glutamate
AL-Quraan et al. 2008AL-Quraan et al. 2008
AL-Quraan et al. 2010AL-Quraan et al. 2010
Expression of CAM genes in cam5-4 and cam6-1
cam5-4 : Shoot
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10111213
CAM1CAM2
CAM3CAM4
CAM5CAM6
CAM7CAM8
CAM9
Nor
mal
ized
Exp
ress
ion
Control (25ºC)Heat Treated (42ºC)
cam5-4 : Root
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101112
CAM1CAM2
CAM3CAM4
CAM5CAM6
CAM7CAM8
CAM9
Nor
mal
ized
Exp
ress
ion
Control (25ºC)Heat Treated (42ºC)
cam6-1 :Root
0123456789
1011
CAM1CAM2
CAM3CAM4
CAM5CAM6
CAM7CAM8
CAM9
Nor
mal
ized
Exp
ress
ion
Control (25ºC)Heat Treated (42ºC)
cam6-1 : Shoot
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101112
CAM1CAM2
CAM3CAM4
CAM5CAM6
CAM7CAM8
CAM9
Nor
mal
ized
Exp
ress
ion
Control (25ºC)Heat Treated (42ºC)
AL-Quraan et al. 2010AL-Quraan et al. 2010
•CAM genes showed differential expression and metabolites partition in root and shoot tissues after exposure to heat.
•Variations the expression of CAM genes in different cam mutants in control and in response to heat suggest interactions between calmodulin isoforms during expression of CAM genes in Arabidopsis.
•cam5-4 and cam6-1 mutants are sensitive to high temperature stress for seed germination, survival/ growth and oxidative damage.
•Sensitivity of cam5-4 presumably resulted from absence of CaM5 protein in cam5-4.
Summary …….Conclusion
• CAM6 was expressed in cam6-1 mutant. Sensitivity of cam6-1 to stress may not be a direct consequence of this mutation.
• Differential tissue specific expression of CAM genes in root and shoot tissues
• Regulatory and compensatory interactions between calmodulin isoforms in expression of CAM genes in Arabidopsis.
• Important role for CaM5 protein in tolerance to abiotic stress in cam5-4.
• Sensitivity of cam6-1 to all environmental stress tested may be mediated indirectly through other alternative mechanism.
• Elevation in GABA shunt metabolites in response to heat stress in cam mutants suggests regulation of GABA level by CaM through GAD activation after the stress exposure.
• Later increase in metabolite level after long exposure may indicate involvement of reduction in cytoplasmic pH/or metabolite partitioning under stress.
Major References
• Locy, R.D., Wu, S-J, Bisnette, J., Barger, T.W., MacNabb, D., Zik, M., Fromm, H., Singh, N.K., Cherry, J.H. (2000). The Regulation of GABA Accumulation by Heat Stress in Arabidopsis. Edited in J.H. Cherry et al: Plant Tolerance to Abiotic Stresses in Agriculture, Role of Genetic Engeneering, 39-52, Kluwer Academics. Netherland.
• AL-Quraan, N.I. Role of Arabidopsis thaliana Calmodulin Isoforms in Tolerance to Abiotic Stress. PhD Dissertation. Auburn University. Alabama.USA. August 2008.
• AL-Quraan. N.I., Robert D. Locy, and Narendra K. Singh. Expression of calmodulin genes in wild type and calmodulin mutants of Arabidopsis thaliana under heat stress. Plant Physiology and Biochemistry. 48: 697 –702. 2010
• Dr. Narendra K.Singh• Dr. Robert D. LocyAuburn University , Alabama, USA
• Dr. Hanan I. MalkawiYarmouk University, JORDAN
• Dr. Zuhair Amr• Dr. Nizar Abu-HarfielJordan University of Science and Technology,
JORADN
Acknowledgement