Polymorphisms in the promoter region of estrogen receptor β gene in endometrial cancer
Transcript of Polymorphisms in the promoter region of estrogen receptor β gene in endometrial cancer
GYNECOLOGIC ONCOLOGY
Polymorphisms in the promoter region of estrogen receptor b genein endometrial cancer
Claus Lattrich • Julia Haring • Susanne Schuler •
Maciej Skrzypczak • Olaf Ortmann • Oliver Treeck
Received: 10 March 2013 / Accepted: 12 August 2013 / Published online: 24 August 2013
� Springer-Verlag Berlin Heidelberg 2013
Abstract
Introduction The development of endometrial cancer is
known to be affected by estrogens. Thus, genetic variations
like single nucleotide polymorphisms (SNPs) in genes
involved in estrogen biosynthesis, metabolism, and signal
transduction might affect risk for endometrial cancer. In
this study, we tested the hypothesis that polymorphisms in
the promoter of ESR2 gene may be associated with sus-
ceptibility to this disease.
Methods We compared the frequency of three SNPs in
the promoter region of ESR2 gene (rs2987983, rs3020450,
and rs3020449) in 135 women with endometrial cancer and
135 healthy women serving as controls by means of allele-
specific tetra-primer PCR.
Results Regarding allele frequency, allele positivity or
genotype frequencies of these SNPs we did not observe any
significant difference between healthy women and women
with endometrial cancer.
Conclusion Our data clearly suggest that the tested SNPs
in the promotor region of human ESR2 gene are not
associated with the development of endometrial cancer.
Keywords Endometrial cancer � Estrogen receptor
b � Single nucleotide polymorphism � Case–control
study
Introduction
Endometrial cancer is the most common type of uterine
cancer in the western world [1]. Although the exact cause
of endometrial cancer is unknown, increased levels of
estrogens appear to play a role in the development of this
disease [2]. Most of the action of estrogens is mediated via
ligand-dependent transcription factors, the estrogen recep-
tors (ER). Identification of the second estrogen receptor
gene ESR2 and its gene product, ERb, has led to a re-
evaluation of estrogen action in target tissues such as
endometrium [3]. ERb is expressed both in normal and
neoplastic endometrial tissue but its role in either is not
fully understood. In contrast to breast and prostate cancer,
ERb expression is not reduced in endometrial cancer, but
distinct splice variants like ERb5 were found to be over-
expressed [4–6]. Thus, this receptor seems to play no tumor
suppressor role in endometrial cancer like suggested in the
breast and prostate. This was corroborated by recent find-
ings by our group showing an association of ERb with
expression of oncogenes like HER2 and MYBL2 in
endometrial cancer [6].
Single nucleotide polymorphisms (SNPs) are the most
frequent sequence variations in the human genome. SNPs
located in exon regions may alter protein function,
whereas SNPs in the gene promoter can modify gene
expression levels [7–9]. Polymorphisms in genes involved
in estrogen biosynthesis, metabolism and signal trans-
duction have been suggested to play a role in hormone-
dependent cancers [10, 11]. In the last years, a multitude
of SNPs both in ESR1 and ESR2 gene have been iden-
tified and different genotype–phenotype association stud-
ies have been published examining the significance of
randomly chosen SNPs in different hormone-dependent
diseases [12–15].
C. Lattrich (&) � J. Haring � S. Schuler � O. Ortmann �O. Treeck
Department of Obstetrics and Gynecology, University Medical
Center Regensburg, 93053 Regensburg, Germany
e-mail: [email protected]; [email protected]
regensburg.de
M. Skrzypczak
Second Department of Gynecology, Medical University of
Lublin, Lublin, Poland
123
Arch Gynecol Obstet (2014) 289:631–635
DOI 10.1007/s00404-013-3012-8
In this study, we examined three SNPs in the promoter
region of human ESR2 gene. We compared allele fre-
quencies of these SNPs in 135 healthy women and 135
women with endometrial cancer.
Patients and methods
Patients
Blood samples from 135 Caucasian women with endome-
trial cancer and such as many Caucasian women not having
any malignancy were collected between 2007 and 2012 by
the Second Department of Gynecology of the Medical
University of Lublin, Poland and by the Clinic of Obstet-
rics and Gynecology, Medical University of Regensburg,
Germany. Patients and controls were matched for gender
and age. The histopathologic characteristics of the patients
are shown in Table 1. Inclusion criterion for the control
subjects was the absence of known malignancies. All
women granted consent for the collection and use of bio-
logic material. Blood samples of patients were collected in
accordance with Polish and German regulations and in
agreement with the Ethical Committees of the University
School of Medicine in Lublin, Poland and the University
Medical Center Regensburg, Germany.
SNP analysis
Three SNPs in the 0N promoter region of ESR2 gene were
identified using the internet sites http://www.genecards.org
and http://www.ncbi.nlm.nih.gov/SNP. The basis for SNP
selection was their location in the 50 region directly adja-
cent to the transcription start site of ESR2 gene. SNP
rs2987983 (C/T) is located at position 63833406 of chro-
mosome 14, rs3020450 (A/G) is located at position
63838055 and SNP rs3020449 (A/G) (formerly rs8004842)
is located at position 63843145 of chromosome 14 (Fig. 1).
Genomic DNA was isolated from 100 ll EDTA-blood
after addition of 300 ll lysis buffer (1 % v/v TritonX,
0.32 M Sucrose, 0.01 M Tris (pH 7.5) and 5 mM MgCl2)
and twofold centrifugation (13,000g) for 30 s. Pellet was
resuspended in 50 ll PCR buffer (GoTaq buffer, Promega,
Madison, USA) containing 0.5 % Tween 20 and 10
Table 1 Characteristics of the endometrial cancer cases (n = 135)
included in this study
FIGO G1 G2 G3
IA 11 – –
IB 22 25 –
IC 13 16 –
IIA – 3 –
IIB – – 17
IIIA – – 28
Old FIGO classification of endometrial cancer (valid until 2010) was
used
Fig. 1 The single nucleotide polymorphisms analyzed in this study
are located in the 50-region of estrogen receptor b gene (ESR2),
namely in the promoter region of untranslated exon 0N
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mAnson units proteinase K (Merck, Darmstadt, Germany)
followed by incubation at 50 �C over night and finally heat
inactivation of the enzyme for 10 min at 95 �C. The
genomic DNA-containing lysate was subjected to a tetra-
primer ARMS PCR approach [16] allowing allele-specific
amplification using the PCR primers listed in Table 2
(synthesized at Metabion, Martinsried, Germany). For this
purpose, to 100 ng of genomic DNA, 2 ll of 5 9 GoTaq
buffer, 0.2 ll of dNTP Mix (10 mM) (Fermentas, St. Leon-
Rot, Germany), 0.2 ll of each PCR primer (10 lM) and
0.5 U GoTaq polymerase (Promega, Madison, USA) were
added and PCR was carried out using a T1 thermocycler
(Biometra, Germany). PCR program was 10 min 94 �C
followed by 38 PCR cycles of 94 �C (30 s), 56 �C (30 s)
and 72 �C (60 s), followed by a final extension for 5 min
step at 72 �C. PCR products were analyzed by 1.5 %
agarose gel electrophoresis. Allele-specific PCR product
sizes for SNP rs2987983 were 180/258 bp (C/T),
156/212 bp (A/G) for rs3020450 and 231/193 bp (A/G) for
SNP rs3020449. As a quality control for genotyping, in
each PCR run three previously characterized DNA samples
representing the heterozygous and the two homozygous
genotypes were analyzed in addition to the unknown
samples.
Statistical analysis
Deviation from the Hardy–Weinberg equilibrium was
estimated by the Fisher’s exact test and the v2 test, and all
values were subjected to one-way ANOVA to achieve
homogeneity of variance. Statistical tests for association
(CI: 95 % confidence interval) and for significance were
carried out using SPSS for Windows 8.0 (SPSS, Inc.,
Chicago, IL, USA). P \ 0.05 was considered statistically
significant. After tests for deviation from Hardy–Weinberg
equilibrium were conducted, allele frequency, allele posi-
tivity and genotype frequencies were determined. Odds
ratio (OR) was calculated using the more frequent homo-
zygous genotypes as reference group.
Results
After genotyping of 135 women with endometrial cancer
and such as many women without any malignancy for
ESR2 SNPs rs2987983, rs3020450, and rs3020449 by
means of allele-specific tetra-primer PCR, we first per-
formed the test for deviation from Hardy–Weinberg equi-
librium, which showed negative results. The following tests
for association did not reveal any significant difference
between both groups with regard to genotype frequency,
allele frequency, or allele positivity of the three ERb SNPs
tested (Table 3).
Discussion
SNPs in genes of the steroid hormone metabolism or sig-
naling are potential factors that could affect cancer risk in
hormone-dependent tissues [17]. Since discovery of ESR2
gene and its product ERb in 1996, several groups have
characterized its unique expression profile, but few have
examined possible associations of ESR2 polymorphisms
with cancer risk. In previous studies, ESR2 SNPs were
demonstrated to be weakly associated with breast cancer,
prostate cancer, anorexia nervosa, bulimia, ovulatory dys-
function and bone mineral density [18–22].
Up to the present there are only two studies examining
the association of randomly chosen ESR2 SNPs and
endometrial cancer risk. In a recent report including 191
endometrial cancer patients, two ESR2 polymorphisms
(rs1255998 and rs944050) were found to be associated with
an increased risk of endometrial cancer [23]. In contrast,
another study examining the ESR2 SNPs rs1256049 and
Table 2 Primer sequences used
for allele-specific tetra primer
PCR
ERb SNP Primer Sequence
rs2987983 IP1 TCACAATTCAGGTAGAATTGGAATAATAAC
IP2 CCTGGTTTAATGCAGAGTGGAGATGA
OP1 ATTGTAGGATATTTTGGAGACAGGCAG
OP2 TTATTATACAAGGAAACCTCACTGCAGG
rs3020449 IP1 GCATTGTCCTTTTTACATATTGTTAGGGTA
IP2 AATTCTCAAGGAAATTTTAGCAAAGCC
OP1 TAGATTTTGTCAAACACTTTTGGTGGAT
OP2 CCAAATGATTAAGGAGAAATAACAGCAG
rs3020450 IP1 TAGTTTCCTTGTGTTCTCTGTTCTCTACG
IP2 GGGAGAAGAGAGCCCAGGATTTCGAT
OP1 CAACTAGGAAGTGTTTGTGCTGAAAACC
OP2 GTCTCTTCTGAATTACACAGGTGCATGG
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rs1271572 reported no association with endometrial cancer
risk [24].
Given that in ESR2 gene, no non-synonymous exon
SNPs exist which would lead to an altered amino acid
sequence of ERb protein; in this study, we decided to
specifically focus on a second type of polymorphisms
with potential functional significance, SNPs in the pro-
moter region of ESR2 gene (Fig. 1). The promoter region
of ESR2 gene is complex and consists of several tissue-
specific promoters and different 50-untranslated exons
[25]. One is at the beginning and thus we hypothesized
that SNPs located in this region could be able to affect
binding of enhancer or repressor proteins regulating
ESR2 gene transcription. Altered ERb protein levels
could then modulate estrogen effects on breast cancer
development. SNPs in the promoter regions of various
genes previously have been associated to the risk for
several diseases [26–29].
To the best of our knowledge, this report is the first one
analyzing the association of ESR2 promoter SNPs
rs2987983, rs3020449, and rs3020450 with endometrial
cancer risk. In contrast to the negative results of this study,
we previously found the CC genotype of SNP rs2987983 to
be weakly associated with breast cancer risk (OR 1.99)
[18]. The same polymorphism previously also was descri-
bed to be a risk factor for prostate cancer development
[22]. The observed lack of association in our endometrial
cancer collective might result from the smaller sample size
or could be explained by the fact that ERb is suggested to
play different roles in pathogenesis of breast and endo-
metrial cancer [6, 30].
In conclusion, our data clearly suggest that the tested
SNPs in the promotor region of human ESR2 gene are not
associated with the development of endometrial cancer.
Acknowledgments We would like to thank Helena Lowack for
excellent technical assistance.
Conflict of interest We declare that we have no conflict of interest.
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SNP Allele
frequency
Allele
positivity
Genotype
frequency
rs2987983 T C T C TT CC CT
Controls 0.63 0.37 0.88 0.59 0.44 0.13 0.43
Cases 0.59 0.41 0.85 0.63 0.45 0.15 0.40
P NS NS NS
rs3020449 A G A G AA GG AG
Controls 0.57 0.43 0.81 0.81 0.34 0.19 0.47
Cases 0.57 0.43 0.67 0.67 0.35 0.20 0.45
P NS NS NS
rs3020450 A G A G AA GG AG
Controls 0.34 0.66 0.54 0.88 0.11 0.42 0.47
Cases 0.33 0.67 0.55 0.89 0.09 0.43 0.48
P NS NS NS
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