Physical Methods in Models of Cataract Disease · •Quenching, red or blue shift suggest change in...
Transcript of Physical Methods in Models of Cataract Disease · •Quenching, red or blue shift suggest change in...
O. P. SrivastavaO. P. SrivastavaDepartment of Vision Science Department of Vision Science
University of Alabama at University of Alabama at BirminghamBirmingham
Physical Methods in Models of Cataract Disease
Function of the Lens:
Refraction
Lens Specific Structural Proteins Lens Specific Structural Proteins ((αα--, , ββ-- and and γγ--CrystallinsCrystallins))
αα--Crystallin:Crystallin:Two primary gene Two primary gene products (products (ααA and A and ααB, B, both 20 kDa), 800 kDa both 20 kDa), 800 kDa oligomer (oligomer (ααA:A:ααB, 3:1), B, 3:1), Chaperone activity. Chaperone activity.
ββ--Crystallin:Crystallin:Eight primary gene Eight primary gene products, 23products, 23--32 kDa 32 kDa (Acidic (Acidic ββA3/A1, A3/A1, ββA3 and A3 and ββA4, Basic A4, Basic ββB1, B1, ββB2, B2, ββB3 and B3 and ββB4), 50B4), 50--200 200 kDa oligomerkDa oligomer
γγ--Crystallin: Crystallin: Six primary Six primary gene products, 20 kDa gene products, 20 kDa ((γγA, A, γγB, B, γγC, C, γγD, D, γγE and E and γγF), monomer.F), monomer.
HMW: >1X106 D
α: 800 kDa
βL60 kDa
γ:20 kDa
βH: 200 kDa
Normal lens
Cataractous lenses
National Eye Institute (NIH)National Eye Institute (NIH)
Most cataracts are related to aging. Most cataracts are related to aging.
By age 80, more than half of all By age 80, more than half of all Americans either have a cataract or Americans either have a cataract or have had cataract surgery.have had cataract surgery.
Estimated Specific Prevalence Rates for Estimated Specific Prevalence Rates for CataractCataract
Source: National Eye InstituteSource: National Eye Institute
Female Male
Summary of Eye Disease Prevalence Data Source: National Eye Institute
Age, Cataract Advanced AMDIntermediate
AMD Glaucoma
Years Persons (%) Persons (%) Persons (%) Persons (%)
40-49 1,046,000 2.5% 20,000 0.1% 851,000 2.0% 290,000 0.7%
50-59 2,123,000 6.8% 113,000 0.4% 1,053,000 3.4% 318,000 1.0%
60-69 4,061,000 20.0% 147,000 0.7% 1,294,000 6.4% 369,000 1.8%
70-79 6,973,000 42.8% 388,000 2.4% 1,949,000 12.0% 530,000 3.9%
>80 6,272,000 68.3% 1,081,000 11.8% 2,164,000 23.6% 711,000 7.7%
Total 20,475,000 17.2% 1,749,000 1.5% 7,311,000 6.1% 2,218,000 1.9%
ICR/f Rat Model: Study Effects of ICR/f Rat Model: Study Effects of Botanicals on Mechanism of AgeBotanicals on Mechanism of Age--
Related Human CataractRelated Human Cataract
Cataract Disease in RatsSprague-Dawley Rat
ICR/f Rat
A colony of ICR/f rats has been established
Development of Lens Opacity in ICR/f Rats
30 Days No Opacity
60 Days A diffused opacity at posterior subcapsular area ( around
suture)
90 Days Dense opacity at the posterior polar
region, rapidly extends to whole cortical region, then to posterior
nuclear region and finally to whole nuclear region
120 days Opacity of whole lens
Time-Line
Grape Seed Extract Slows Onset of Grape Seed Extract Slows Onset of Cataract Disease in ICR/f RatsCataract Disease in ICR/f Rats
ICR/f rats imported from Meijo University in Japan to create a breeding colony at UAB
Inbred strain derived from the original ICR rats
Cataract formation significantly slowed by 0.2% grape seed extract in the diet (Yamakoshi et al., 2002)
New experiments will evaluate a dose-response curve for PACNs (0.1-5%)
Control at <30 days
GSE diet; 27 days later
Control diet; 27 days later
ICR/f Rats (Cataract inherited through an autosomal recessive gene)
10X higher Ca+2
Activation of m-calpain and
transglutamase
GSH and water soluble proteins
decrease, oxidation of Met
Increasein HMW proteins
Increase in C-terminally
truncated αA and αB-crystallin
Racemization and isomerization of Asp-151 of αA-crystallin
Increased phosphorylation of Ser
of C-terminally truncated αA and αB-
crystallins
Cross-linking of αA-
crystallin
(Aggregation and Cross-Linking)
γ, βB1 and βA3-
crystallins decreased
Increase in lipid
peroxide in serum
(Oxidative Insult) (Racemization)
(Increased Phosphorylation)(Proteolysis)
What is Molecular Mechanism of What is Molecular Mechanism of Cataract Development in ICR/f Cataract Development in ICR/f
Rats?Rats?
How Do AgeHow Do Age--Related Cataracts Related Cataracts Develop?Develop?
Clumps of protein accumulate in lens Clumps of protein accumulate in lens and become insoluble causing opacity.and become insoluble causing opacity.
The clear lens slowly changes to a The clear lens slowly changes to a yellowish/brownish color, adding a yellowish/brownish color, adding a brownish tint to vision. brownish tint to vision.
Source: National Eye Institute
Lens α-, β- and γ-Crystallins [Water Soluble]
Conformation Changes
Aggregation (Hydrophobic interactions)[Water Soluble-HMW- and Water Insoluble Proteins]
Covalent Cross-Linking(Disulfide and non-disulfide types)
[Water Soluble and Water Insoluble]
Opacity [Water Insoluble]
Post-translational modifications during
Aging
HYPOTHESIS
Conformational Changes Leading to Conformational Changes Leading to Aggregation and CrossAggregation and Cross--LinkingLinking
Racemization
Increasedphosphorylation
Proteolysis
Oxidative insult
Conformational changes
Aggregation and
Cross-linking
Conformational Changes in Conformational Changes in Proteins and Protein AggregatesProteins and Protein AggregatesTwoTwo--Dimensional gel Electrophoresis Dimensional gel Electrophoresis and Mass Spectrometric Analysesand Mass Spectrometric AnalysesMolecular weights of Aggregates and Molecular weights of Aggregates and Identification of their components Identification of their components (Dynamic Light(Dynamic Light--Scattering and BlueScattering and Blue--native Gel Electrophoresis) native Gel Electrophoresis) Secondary and Tertiary Structures of Secondary and Tertiary Structures of Modified Proteins Modified Proteins (CD Spectroscopy)(CD Spectroscopy)Structural Changes in Modified Structural Changes in Modified Proteins Proteins (Determination of (Determination of hydrophobicity and Trp fluorescence)hydrophobicity and Trp fluorescence)
Fractionation of Human Lens Fractionation of Human Lens ProteinsProteins
Lens HomogenateLens HomogenateCentrifuge
Water Soluble Protein Fraction
Water Insoluble Protein Fraction
Urea Soluble Fraction
Urea Insoluble Fraction
Centrifuge Urea Solubilization
HMW Protein Fraction
(>1 X106 D)
Changes with aging and cataract
#21 Old_highSoy
β-B2-crystallinsβ-A3-crystallins
α-A crystallins α-B crystallins20
10
253750
250
15
100150
75
#89 Young_Control
#57 Old_control
β-B2-crystallinsβ-A3-crystallins
α-A crystallinsα-B crystallins
β-B2-crystallinsβ-A3-crystallins
α-A crystallins α-B crystallins
2DE-Profiles of Lens WS Proteins fromMonkeys Fed Soy
Molecular Mass of Protein Molecular Mass of Protein Aggregates and Identification of Aggregates and Identification of
their Components their Components
(Dynamic Light(Dynamic Light--Scattering Method and Scattering Method and BlueBlue-- native Gel Electrophoresis)native Gel Electrophoresis)
Determination of Molecular Weights and Determination of Molecular Weights and Hydrodynamic Radai of WSHydrodynamic Radai of WS--HMW ProteinsHMW Proteins
WS-Proteins
Size-exclusion HPLC using TSK G-5000 PWXL Column
Determine absolute molar mass and hydrodynamic radius
Monitor protein absorbance, light
scattering by QUELS (quasielastic light
scattering device)and refractive index
(DAWN HELEOS)
Time (Min)
A280
Protein Profile of WS-Proteins from a 60 Year-Old Human Donor
Light scattering A280
Refractive index
WS-HMW Proteins in Aging Human Lenses After Size-Exclusion Chromatography
Molecular Mass of HMW Proteins Molecular Mass of HMW Proteins from Human Lensesfrom Human Lenses
human lens (years)
0 20 40 60 80 100
Abs
olut
e m
olec
ular
mas
s
0
200
400
600
800
1000
1200
1400
1600
860 kDa 955 kDa
1196 kDa
1468 kDa
2D-Blue Native Gel Electrophoresis to analyze Protein Aggregates
Secondary and Tertiary Secondary and Tertiary Structures of Modified Proteins Structures of Modified Proteins
(CD Spectroscopy)(CD Spectroscopy)
Circular Dichroism Spectroscopy Circular Dichroism Spectroscopy is Particularly Good for:is Particularly Good for:
SSecondary and econdary and tertiary structuretertiary structuress of of proteinsproteinsComparing Comparing structures for different mutantsstructures for different mutants of of the same proteinthe same proteinStudying the Studying the conformational stability of a conformational stability of a protein under stress protein under stress ---- thermal stabilitythermal stability, , pHpH stability, and stability to denaturantsstability, and stability to denaturantsFor finding For finding solvent conditions that increase solvent conditions that increase the melting temperature and/or the the melting temperature and/or the reversibility of thermal unfoldingreversibility of thermal unfolding conditions conditions which generally enhance shelf life.which generally enhance shelf life.Determining whether Determining whether proteinprotein--protein protein interactionsinteractions alter the conformation of protein.alter the conformation of protein.
Determination of Protein Secondary Determination of Protein Secondary Structure by Circular DichroismStructure by Circular DichroismSecondary structure Secondary structure can be determined by can be determined by CD spectroscopy in CD spectroscopy in the "farthe "far--uv" spectral uv" spectral region (190region (190--250 nm). 250 nm). At these wavelengths At these wavelengths the chromophore is the chromophore is the peptide bond, and the peptide bond, and the signal arises the signal arises when it is located in a when it is located in a regular, folded regular, folded environment. environment.
Polylysine
Mutants of Human Lens Beta A3Mutants of Human Lens Beta A3--CrystallinCrystallin
CD Spectra of Mutant Proteins of CD Spectra of Mutant Proteins of ββA3A3--CrystallinCrystallin
Absorption Spectra of Phe, Trp and Tyr
295 nm
Intrinsic Trp Fluorescence Spectra of Native and Denatured WT-βA3 and its eight Truncated Mutant Proteins.
Intrinsic Trp Fluorescence Spectra:•Excitation at 295 nm and emission between 300-400 nm.
•Quenching, red or blue shift suggest change in microenvironment of Trp residues.
βA3-crystallin contains 9Trp residues; two are exposed (139, 153), four are buried (73, 99, 168, and 198) and three are partially buried (36, 96, 195).
Fluorescence Spectra of WT βA3 and its Eight Deletion Mutant Proteins After ANS Binding
ANS (8-amilino 1-naphthalenesulfate):
•A hydrophobic probe
•Binding is assessed by fluorescence spectra (Excitation at 390 nm and emission between 400 to 600 nm)
•Quenching; Reduced binding
•Red Shift: Increased exposure of hydrophobic patches.
•Blue Shift: Decreased exposure of hydrophobic patches.