Figure 1 - Centre national de la recherche scientifique · 2017-12-06 · k10 k11 k13 k12 k14 k20...

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FSH FSHR LH LHR Gs Gi Gq Gh EGFR Src Transactivation PLCδ IP3 cAMP PKA ERK EPAC PI3K Akt p38 Cdk4 Appl1 ßarr Rps6 PDE Figure 1

Transcript of Figure 1 - Centre national de la recherche scientifique · 2017-12-06 · k10 k11 k13 k12 k14 k20...

Page 1: Figure 1 - Centre national de la recherche scientifique · 2017-12-06 · k10 k11 k13 k12 k14 k20 k24 k19 k23 k17 k18 k5 k9 k22 k21 k25 k16 k15 Model equations Conservation laws Biological

FSH

FSHR

LH

LHR

Gs

Gi

Gq

Gh

EGFR

Src

Transactivation

PLCδ

IP3

cAMP

PKAERK EPAC PI3K

Aktp38

Cdk4

Appl1

ßarr

Rps6

PDE

Figure 1

Page 2: Figure 1 - Centre national de la recherche scientifique · 2017-12-06 · k10 k11 k13 k12 k14 k20 k24 k19 k23 k17 k18 k5 k9 k22 k21 k25 k16 k15 Model equations Conservation laws Biological

k0

k1

Ordinary differential equation (ODE)

Mass action law:

k0

k1Mass action law:

(1)

(2)

(3)

A

B

A B

A B

C

k0

k1

k2 k3

k4

C DA B

C D E

F G

[B]

Time

Simulation

δ1

δ2

δ3

δ4δ5

Experimentalpoints

E Initial parameter values (k0, ...,kn)

Simulation

Compute errorChange (k0,..., kn)

Done !

Error=0 ?

δ0B

B

B

B

BB

error =f(δ0, δ1, δ2, δ3, δ4, δ5 )B B B B B B B

Page 3: Figure 1 - Centre national de la recherche scientifique · 2017-12-06 · k10 k11 k13 k12 k14 k20 k24 k19 k23 k17 k18 k5 k9 k22 k21 k25 k16 k15 Model equations Conservation laws Biological

pER

K (

µm

ol/L

)

[Ang]

Figure 3

k0k1k2k6

k3

k7

k4

k8

k10

k11 k13 k12 k14 k20 k24 k19 k23

k17

k18

k5

k9

k22k21

k25

k16

k15

Model equations Conservation laws

Biological conditions• Condition 1: control• Condition 2: PKC inhibition, k29 k33• Condition 3: siRNA Barr2, k31 k34• Condition 4: siRNA GRK23, k10 k35• Condition 5: siRNA GRK56, k18 k36

A

B

C

Page 4: Figure 1 - Centre national de la recherche scientifique · 2017-12-06 · k10 k11 k13 k12 k14 k20 k24 k19 k23 k17 k18 k5 k9 k22 k21 k25 k16 k15 Model equations Conservation laws Biological

[C]

Time

Stimulation

A B

Time

Stimulation

[C]

Figure 4

Page 5: Figure 1 - Centre national de la recherche scientifique · 2017-12-06 · k10 k11 k13 k12 k14 k20 k24 k19 k23 k17 k18 k5 k9 k22 k21 k25 k16 k15 Model equations Conservation laws Biological

Epac

RFP GFPEpac

RFP GFP

BRET

cAMP

BRET

A

BRETBRET

Rluc

Ven

Gß/γ

Rluc

Ven

Gß/γ

B

BRET

cha

nge

Time (min)

FSH

Time (min)

LH

Time (min) Time (min)

GFP

BRET

C

AEQ

Ca2+

GFPAEQ

D

BRETßarryPet

Rluc Rlucßarr

yPet

+hFSH +hCGTime (s) Time (s)

Time (min) Time (min)

+hFSH +hCG

Figure 5

Page 6: Figure 1 - Centre national de la recherche scientifique · 2017-12-06 · k10 k11 k13 k12 k14 k20 k24 k19 k23 k17 k18 k5 k9 k22 k21 k25 k16 k15 Model equations Conservation laws Biological

% o

f res

pons

e

log([hFSH]) log([hCG])

Figure 6

Page 7: Figure 1 - Centre national de la recherche scientifique · 2017-12-06 · k10 k11 k13 k12 k14 k20 k24 k19 k23 k17 k18 k5 k9 k22 k21 k25 k16 k15 Model equations Conservation laws Biological

Effector

Kd

τ

Ligand

[Ligand]

[Effector]

Emax

EC50

A

Kd

Ligand

B

Effector1 Effector2

[Ligand]

[Effector]

Emax-1

EC50

-1

Emax-2

EC50

-2

Kd

Ligand

C

Effector1 I1

Effector2

τ1 τ2

Kd

FSH

D

Gαs ß-arrestin

τ(G,FSH) τ(ß,FSH)

Kd

L1

Gαs ß-arrestin

τ(G,L1) τ(ß,L1)

τ(ß,L1)τ(G,L1)

τ(ß,FSH)τ(G,FSH)>

Kd

L2

Gαs ß-arrestin

τ(G,L1) τ(ß,L1)

τ(ß,L2)τ(G,L2)

τ(ß,FSH)τ(G,FSH)<

Figure 7

Page 8: Figure 1 - Centre national de la recherche scientifique · 2017-12-06 · k10 k11 k13 k12 k14 k20 k24 k19 k23 k17 k18 k5 k9 k22 k21 k25 k16 k15 Model equations Conservation laws Biological

Time (min)

activ

e G

(µm

ol/L

)

AT1-

ß-ar

rest

in 2

sig

nalin

g co

mpl

ex (µ

mol

/L)

Time (min)

Figure 8