Biology 427 Biomechanics Lecture 12. Molecular motors...

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•Recap vibrations •Motility at the cellular and sub-cellular level •Diversity of molecular motors •The fundamental problem of converting chemical energy into mechanical energy. •Converting mechanical energy into motion •Myosin — the basis of movement with muscle. Biology 427 Biomechanics Lecture 12. Molecular motors

Transcript of Biology 427 Biomechanics Lecture 12. Molecular motors...

Page 1: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

•Recap vibrations

•Motility at the cellular and sub-cellular level

•Diversity of molecular motors

•The fundamental problem of converting chemical energy into mechanical energy.

•Converting mechanical energy into motion

•Myosin — the basis of movement with muscle.

Biology 427 BiomechanicsLecture 12. Molecular motors

Page 2: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

x = sin(2π ft)If you know x, what is F for our Kangaroo model?

F = kx +µ dxdt+m d 2x

dt2µ

= sin(ωt)

f = 12π

km

Page 3: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

How does the motion (x) change as we input a force near resonance? A sample demonstration in Mathematica.

Page 4: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

Motility at the cellular and sub cellular level: axonal transport

Page 5: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

Processive motors transport cargo

Drew Berry, 2013

Page 6: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

Motility at the cellular and sub cellular level: cilia and flagella

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Motility at the cellular and sub cellular level: cell division

images from von Dassow et al. Friday Harbor Labs

Page 8: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

Motility at the cellular and sub cellular level: muscle

images from von Dassow et al. Friday Harbor Labs

Page 9: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

One myosin to stand in for all

This one

Oh, and this one

But really,this one

Page 10: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

Kinesin: mostly + directedDynein: mostly - directed

Motility at the cellular and sub cellular level: three motor proteins use the energy of ATP hydrolysis

Page 11: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

Motility at the cellular and sub cellular level: three motor proteins use the energy of ATP hydrolysis

ATP ~ 0.7 nmADP ~ 0.7 nmP ~ 0.1 nm5.46 104 J/mol

9 10-20 J

Page 12: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

Motility at the cellular and sub cellular level: measure mechanics and kinematics at this tiny scale

Page 13: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

Motility at the cellular and sub cellular level: measure mechanics and kinematics at this tiny scale

Page 14: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

Some images adapted from Viegal et al, 1998, 1999 and Howard, 2001

Page 15: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

Motility at the cellular and sub cellular level: three motor proteins use the energy of ATP hydrolysis

ATP ~ 0.7 nmADP ~ 0.7 nmP ~ 0.1 nm5.46 104 J/mol

9 10-20 J Forc

e (p

N)

displacement (nm)

If the step length of a motor protein is 8 nm and it has all of the energy of ATP hydrolysis available, how much force can it generate?

Page 16: Biology 427 Biomechanics Lecture 12. Molecular motors ...courses.washington.edu/biomechs/lectures/lecture12.pdf · •Motility at the cellular and sub-cellular level •Diversity

Image adapted from Howard, 2001

X-ray diffraction