256 spatial encoding part 2
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Transcript of 256 spatial encoding part 2
Slice Selectionslice thickness is determined by gradient strength
β
β0
ω
ω0
RF bandwidth1
3
2
ΖΖtt11
tt22
tt33
Slice Selection
Selection of an axial slice is accomplished by the z gradient.
zz gradient direction gradient direction
ω = ω0
graph of the z magnetic gradient
z-axis
β β = β0β > β0
β < β0
Slice Selectionslice location is determined by the null point of the z gradient
β
β0
ω
ω0
RF bandwidth
slice 1
ΖΖ
slice 2 slice 3
Ζ1 Ζ2 Ζ3
Frequency Encoding
• Within the imaging plane, a small gradient is applied left to right to allow for spatial encoding in the x direction.
• Tissues on the left will have a slightly higher resonance frequency than tissues on the right.
• The superposition of an x gradient on the patient is called frequency encoding.
• Frequency encoding enables spatial localization in the L-R direction only.
Frequency Encoding
RF signal RF signal from from entireentire slice slice
A/D conversion, 256 pointsA/D conversion, 256 points 1 line ofk-space
Phase Encoding
• An additional gradient is applied in the y direction to encode the image in the remaining direction.
• Because the x gradient alters the frequencies in the received signal according to spatial location, the y gradient must alter the phase of the signal.
• Thus, the points of k-space are revealed by recording the digitized RF signal after a phase encoding gradient application.
Phase Encoding
• The technique of phase encoding the second dimension in the imaging plane is sometimes referred to as spin warping.
• The phase encoding gradient is “stepped” during the acquisition of image data for a single slice. Each step provides a unique phase encoding.
• For a 256 x 256 square image matrix, 256 unique phase encodings must be performed for each image slice. The second 256 points in the x direction are obtained by A to D conversion of the received signal.
Phase Encoding
z
y
x
yy gradient, gradient,
phase step #192phase step #192
yy gradient, gradient,
phase step #64phase step #64
Phase Encoding
2D k-space matrixgradient strength +128
RF in RF outRF out A/D conversion
gradient strength N
RF in RF outRF out A/D conversion
gradient strength -128
RF in RF outRF out A/D conversion
END
BEGIN
line 128
line N
line -128
Spin Echo Imaging
RF
z gradient
echo
90°180°echo
90°180°echo
90°180°
y gradient
x gradient
slice select
phase
readout
Spin Echo Imaging
view -128
view -55
view 40
k-space256 x 256 points
row 40
row -55
row -128
A/D, 256 points
kx = frequencyky = phase
• Acquisition of spatially encoded data as described allows for reconstruction of the MR image.
• The frequency and phase data are acquired and form points in a 2D array .
• Reconstruction of the image is provided by 2D inverse Fourier transform of the 2D array.
• This method of spatially encoding the MR image is called 2D FT imaging.
MR Image Reconstruction
Discrete Fourier Transform
F(kx,ky) is the 2D discrete Fourier transform of the image f(x,y)
f x yN
F k k exk yk
kkx y
jN
x jN
yNN
yx
( , ) ( , )=+
=
−
=
−
∑∑12
2 2
0
1
0
1 π π
x
y
f(x,y)
kx
ky
ℑ
k-space
F(kx,ky)
MR image
Image Resolution and Phase Encoding• Resolution is always maximum in the
frequency encoding direction because the MR signal is always digitized into 256 points.
• Resolution can vary in the phase encoding direction depending on the number of phase steps used to acquire the image.
• Because each phase encoding requires a separate 90 and 180 degree pulse, image acquisition time is proportional to the number of phase encode steps.
• Example, TR 2000, 192 phase steps, 1 NEXimaging time = 6.4 minutes
• At this rate, it would take 128 minutes to do an average 20 slice exam.
• Because TR is typically much longer than TE, we can acquire the data for the other slices between the 90 degree RF pulses.
Image Acquisition Time
Multi-slice Imaging
echo
90°180°
echo
90°180°
echo
90°180°
echo
90°180°
slice 1
slice 2
slice 3
TRTR
TETE
• The maximum number of slices that can be obtained in a single acquisition is calculated as follows:
Multi-slice Imaging
( )TR
TE
msec
msec + C
C msec= −10 20
k-space Traversal
• The most important phase encoding information is centered around the middle of k-space.
• Typically, k-space is filled in an orderly manner, beginning with the returned echos obtained at the maximum negative y gradient strength and continuing to the maximum positive value.
• For images obtained with less than 256 views, the number of phase encodings is evenly divided between positive and negative values centered around zero.
• Images reconstructed with less than 256 phase encodings have less detail in the phase encoding direction.
k-space Traversal
• Because k-space is symmetrical, one half of the space can be determined from knowledge of the other half.
• Imaging time can be reduced by a factor of 2 by collecting either the positive or the negative phase encodings and filling the remainder of k-space with the mirrored data.
Half Fourier Imaging
• This technique is sometimes referred to as ‘half NEX’ imaging or ‘PCS’ (phase conjugate symmetry).
• Penalty: reduced signal decreases the signal to noise ratio, typically by a factor of 0.71.
Half Fourier Imaging
• The frequency half of k-space can also be mirrored.
• This technique is called fractional echo or ‘RCS’ (read conjugate symmetry).
• Decreased read time enables more slices per acquisition at the expense of reduced signal.
Half Fourier Imaging
3D Acquisition
• 3D is an extension of the 2D technique.
advantages:
true contiguous slices
very thin slices (< 1 mm)
no partial volume effects
volume data acquisition
disadvantages:
gradient echo imaging only
(3D FSE now available)
motion sensitive
3D Acquisition
• no slice select gradient
• entire volume of tissue is excited
• second phase encoding gradient replaces the slice select gradient
• after the intial RF pulse (α), both y and z gradients are applied, followed by application of the x gradient during readout (echo)
• the z gradient is changed only after all of the y gradient phase encodes have generated an echo, then the z gradient is stepped and the y gradient phase encodes are repeated
3D Acquisition
( ) ( )TR number phase encodings number phase encodings NEXmsec∗ ° ∗ ° ∗1 2
60,000